RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 SACM1LQ9NTJ5 587 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 CD300AQ9UGN4 299 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 APOBEC3BQ9UH17 382 aaKnown RBP13.03□□□□□ -0.32
SPAST-201ENST00000315285 SLC7A7Q9UM01 511 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 GPR34Q9UPC5 381 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 IGLV3-10A0A075B6K4 115 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 NPC1O15118 1278 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 APOC1P02654 83 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 FRKP42685 505 aaPredicted RBP13.03□□□□□ -0.32
SPAST-201ENST00000315285 NHSL2Q5HYW2 709 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 GPAT4Q86UL3 456 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 MFSD6LQ8IWD5 586 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 SYNPOQ8N3V7 929 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 PMM1Q92871 262 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 PNPLA2Q96AD5 504 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 PRRC1Q96M27 445 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 GPR174Q9BXC1 333 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 ATG5Q9H1Y0 275 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 HPF1Q9NWY4 346 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 KLHL21Q9UJP4 597 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 CSNK1G3Q9Y6M4 447 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 HTR3EA5X5Y0 456 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 KLKB1P03952 638 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 JUNDP17535 347 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 TUBB3Q13509 450 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 DESI1Q6ICB0 168 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 TMPRSS9Q7Z410 1059 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 CDRT4Q8N9R6 151 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 PEX11GQ96HA9 241 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 PLCL2Q9UPR0 1127 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 TEX13DA0A0J9YY54 714 aaPredicted RBP13.03□□□□□ -0.32
SPAST-201ENST00000315285 A0A1W2PPL8 197 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 CLEC3AO75596 197 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 SCGNO76038 276 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 UCHL1P09936 223 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 H2BFMP0C1H6 154 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 DEFB103AP81534 67 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 GRK1Q15835 563 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 PTRH1Q86Y79 214 aaKnown RBP13.03□□□□□ -0.32
SPAST-201ENST00000315285 VWA5B2Q8N398 1253 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 CCDC120Q96HB5 630 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 GPR78Q96P69 363 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 ALG8Q9BVK2 526 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 POTEKPQ9BYX7 375 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 CLEC4EQ9ULY5 219 aa13.03□□□□□ -0.32
SPAST-201ENST00000315285 URB1O60287 2271 aaKnown RBP13.03□□□□□ -0.32
SPAST-201ENST00000315285 LYRM1O43325 122 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 RP2O75695 350 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 HEXBP07686 556 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 FXYD6P3P58550 94 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 PHC2Q8IXK0 858 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 OR6Q1Q8NGQ2 317 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 CREB3L4Q8TEY5 395 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 SERINC2Q96SA4 455 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 CWH43Q9H720 699 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 C14orf166Q9Y224 244 aaKnown RBP13.02□□□□□ -0.32
SPAST-201ENST00000315285 NRAPQ86VF7 1730 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 FAM221BA6H8Z2 402 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 PPP1R3DO95685 299 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 SGSHP51688 502 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 ZNF584Q8IVC4 421 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 RASGEF1AQ8N9B8 481 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 UBTD2Q8WUN7 234 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 TCEAL4Q96EI5 215 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 SHDQ96IW2 340 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 MSLNLQ96KJ4 702 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 PITHD1Q9GZP4 211 aaPredicted RBP13.02□□□□□ -0.32
SPAST-201ENST00000315285 EPHA6Q9UF33 1036 aa13.02□□□□□ -0.32
SPAST-201ENST00000315285 CHP2O43745 196 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 PGCP20142 388 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 TMEM225Q6GV28 225 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 CNIH2Q6PI25 160 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 TMEM207Q6UWW9 146 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 OR8J2Q8NGG1 315 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 OR51L1Q8NGJ5 315 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 OR2L8Q8NGY9 312 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 OR2T4Q8NH00 348 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 ASB15Q8WXK1 588 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 GGHQ92820 318 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 MUL1Q969V5 352 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 ABCD2Q9UBJ2 740 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 MGAT4CQ9UBM8 478 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 MGAT4AQ9UM21 535 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 SCGB1D2O95969 90 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 CEBPBP17676 345 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 DPP6P42658 865 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 CDK3Q00526 305 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 LRFN4Q6PJG9 635 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 TRIM46Q7Z4K8 759 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 TMEM173Q86WV6 379 aaPredicted RBP13.02□□□□□ -0.33
SPAST-201ENST00000315285 CPNE2Q96FN4 548 aaPredicted RBP13.02□□□□□ -0.33
SPAST-201ENST00000315285 MACROD1Q9BQ69 325 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 TREM1Q9NP99 234 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 CD93Q9NPY3 652 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 FBXL3Q9UKT7 428 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 NUP50Q9UKX7 468 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 B3GNT3Q9Y2A9 372 aa13.02□□□□□ -0.33
SPAST-201ENST00000315285 TIMP1P01033 207 aa13.01□□□□□ -0.33
SPAST-201ENST00000315285 PTGER1P34995 402 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms