RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LRRC25Q8N386 305 aaPredicted RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 AVL9Q8NBF6 648 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 GGHQ92820 318 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 KLHDC7BQ96G42 594 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 GPA33Q99795 319 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 FNDC11Q9BVV2 318 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 KCND3Q9UK17 655 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 UNC13CQ8NB66 2214 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 FGF17O60258 216 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 LRP4O75096 1905 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 ALOX12P18054 663 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 COPZ1P61923 177 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 EXOSC7Q15024 291 aaKnown RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 LRIT3Q3SXY7 679 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 DESI1Q6ICB0 168 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 IQCHQ86VS3 1027 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 METTL27Q8N6F8 245 aaPredicted RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 OR4K14Q8NGD5 310 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 ADAMTS15Q8TE58 950 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 ZDHHC1Q8WTX9 485 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 TM4SF19Q96DZ7 209 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 CCDC3Q9BQI4 270 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 LRRC61Q9BV99 259 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 SLC38A1Q9H2H9 487 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 TP63Q9H3D4 680 aaPredicted RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 C3orf14Q9HBI5 128 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 HSMCR30P0CW71 290 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 GSTM5P46439 218 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 CRISP1P54107 249 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 UBE2IP63279 158 aaKnown RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 DBPQ10586 325 aaPredicted RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 SYT6Q5T7P8 510 aaPredicted RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 FAM92BQ6ZTR7 304 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 PTCHD4Q6ZW05 846 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 OR56A1Q8NGH5 318 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 OR9A4Q8NGU2 314 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 BAHD1Q8TBE0 780 aaPredicted RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 C17orf50Q8WW18 174 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 PIK3R3Q92569 461 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 GIMAP5Q96F15 307 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 UBE2ZQ9H832 354 aaPredicted RBP11.63□□□□□ -0.55
RNF4-201ENST00000314289 FBXO34Q9NWN3 711 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 HSPE1-MOB4S4R3N1 261 aa11.63□□□□□ -0.55
RNF4-201ENST00000314289 LOC100506127A0A0U1RQW1 187 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 A0A1W2PPC4 97 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 CASC3O15234 703 aaKnown RBP11.62□□□□□ -0.55
RNF4-201ENST00000314289 RDH16O75452 317 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 WNT1P04628 370 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 SOX18P35713 384 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 IFITM2Q01629 132 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 MAP4K2Q12851 820 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 ERV3-1Q14264 604 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 GPR68Q15743 365 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 RSBN1Q5VWQ0 802 aaPredicted RBP11.62□□□□□ -0.55
RNF4-201ENST00000314289 BHLHB9Q6PI77 547 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 SPATC1Q76KD6 591 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 SVOPQ8N4V2 548 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 CSNK1A1LQ8N752 337 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 ZNF764Q96H86 408 aaPredicted RBP11.62□□□□□ -0.55
RNF4-201ENST00000314289 CPNE5Q9HCH3 593 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 LYARQ9NX58 379 aaKnown RBP11.62□□□□□ -0.55
RNF4-201ENST00000314289 DNAJC27Q9NZQ0 273 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 CHST2Q9Y4C5 530 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 PCDHGB1Q9Y5G3 927 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 NT5EP21589 574 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 ST3GAL4Q11206 333 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 DUSP5Q16690 384 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 ZNF404Q494X3 552 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 SOWAHCQ53LP3 525 aaPredicted RBP11.62□□□□□ -0.55
RNF4-201ENST00000314289 PGBD2Q6P3X8 592 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 DNAJC22Q8N4W6 341 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 CAMKVQ8NCB2 501 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 B3GNT7Q8NFL0 401 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 NT5CQ8TCD5 201 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 SERINC2Q96SA4 455 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 PHF7Q9BWX1 381 aaPredicted RBP11.62□□□□□ -0.55
RNF4-201ENST00000314289 UCK2Q9BZX2 261 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 HOXD1Q9GZZ0 328 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 POLR2J3Q9H1A7 115 aaKnown RBP11.62□□□□□ -0.55
RNF4-201ENST00000314289 MAN2C1Q9NTJ4 1040 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 POT1Q9NUX5 634 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 IL20RAQ9UHF4 553 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 IFT52Q9Y366 437 aa11.62□□□□□ -0.55
RNF4-201ENST00000314289 SYNDIG1LA6NDD5 238 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 SLC9B1P1A6NJY1 282 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 STK25O00506 426 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 TNFSF14O43557 240 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 AIREO43918 545 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 SRFP11831 508 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 TRHRP34981 398 aaPredicted RBP11.61□□□□□ -0.55
RNF4-201ENST00000314289 MAN2A2P49641 1150 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 CXCR4P61073 352 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 TDGQ13569 410 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 TMEM64Q6YI46 380 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 ABHD13Q7L211 337 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 OR4K5Q8NGD3 323 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 ZNF486Q96H40 463 aaPredicted RBP11.61□□□□□ -0.55
RNF4-201ENST00000314289 BCL7BQ9BQE9 202 aa11.61□□□□□ -0.55
RNF4-201ENST00000314289 ORAI3Q9BRQ5 295 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms