RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 A0A087WV62 115 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 TRGV8A0A0C4DH27 118 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 SCO2O43819 266 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 CRYABP02511 175 aaKnown RBP11.02□□□□□ -0.65
SCFD1-201ENST00000311943 COL8A1P27658 744 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 MAPK1P28482 360 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 SOAT1P35610 550 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 MAP3K8P41279 467 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 STX5Q13190 355 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 TP53BP2Q13625 1128 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 EMC4Q5J8M3 183 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 OGFOD2Q6N063 350 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 MFSD12Q6NUT3 480 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 DNAJC14Q6Y2X3 702 aaPredicted RBP11.02□□□□□ -0.65
SCFD1-201ENST00000311943 WDSUB1Q8N9V3 476 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 OR5M9Q8NGP3 310 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 OR4C3Q8NH37 302 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 RAB3IL1Q8TBN0 382 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 GPR151Q8TDV0 419 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 CDS1Q92903 461 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 VPS33AQ96AX1 596 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 SLC35A4Q96G79 324 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 SGCZQ96LD1 299 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 NPAS1Q99742 590 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 FAM173AQ9BQD7 235 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 GPATCH2Q9NW75 528 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 GIN1Q9NXP7 522 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 ASIC5Q9NY37 505 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 SPRR3Q9UBC9 169 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 PRODH2Q9UF12 536 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 OR10H1Q9Y4A9 318 aa11.02□□□□□ -0.65
SCFD1-201ENST00000311943 CENPVL1A0A0U1RR11 272 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 CLEC18AA5D8T8 446 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 SYNDIG1LA6NDD5 238 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 NPIPA2E9PIF3 369 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 NPIPA3F8WFD2 350 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 TO15178 435 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 SLC19A2O60779 497 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 ZG16O60844 167 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 TRIM3O75382 744 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 CCT3P49368 545 aaKnown RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 NRG3P56975 720 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 EIPR1Q53HC9 387 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 CLEC18BQ6UXF7 455 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 MARCH3Q86UD3 253 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 SAMD14Q8IZD0 417 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 FBXW8Q8N3Y1 598 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 SLC15A4Q8N697 577 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 CLEC18CQ8NCF0 446 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 PNPT1Q8TCS8 783 aaKnown RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 CHMP6Q96FZ7 201 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 ZNF703Q9H7S9 590 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 NPHS2Q9NP85 383 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 SERHLQ9NQF3 203 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 ACSS1Q9NUB1 689 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 WBP11Q9Y2W2 641 aaKnown RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 SLC6A5Q9Y345 797 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 KIAA1549Q9HCM3 1950 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 PCNX1Q96RV3 2341 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 ADGRG4Q8IZF6 3080 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 AGFG2O95081 481 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 UBAP2LQ14157 1087 aaKnown RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 INAQ16352 499 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 WIPI1Q5MNZ9 446 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 DCST1Q5T197 706 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 ANGPTL8Q6UXH0 198 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 R3HCC1LQ7Z5L2 792 aaKnown RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 YRDCQ86U90 279 aaKnown RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 TRIM42Q8IWZ5 723 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 SLC34A3Q8N130 599 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 C17orf47Q8NEP4 570 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 OR4A15Q8NGL6 344 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 OR5M1Q8NGP8 315 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 RAB8BQ92930 207 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 ZNF524Q96C55 264 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 NTNG2Q96CW9 530 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 MTERF3Q96E29 417 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 MAGEB18Q96M61 343 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 COL21A1Q96P44 957 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 LMF2Q9BU23 707 aaKnown RBP11.01□□□□□ -0.65
SCFD1-201ENST00000311943 ANGPTL4Q9BY76 406 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 METTL7AQ9H8H3 244 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 CBLCQ9ULV8 474 aa11.01□□□□□ -0.65
SCFD1-201ENST00000311943 SETXQ7Z333 2677 aaKnown RBP11□□□□□ -0.65
SCFD1-201ENST00000311943 PRAMEF27A3QJZ7 478 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 SHISA8B8ZZ34 492 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 EMC8O43402 210 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 MRPS22P82650 360 aaKnown RBP11□□□□□ -0.65
SCFD1-201ENST00000311943 ELOAQ14241 798 aaKnown RBP11□□□□□ -0.65
SCFD1-201ENST00000311943 NDUFAF6Q330K2 333 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 EXOSC6Q5RKV6 272 aaKnown RBP11□□□□□ -0.65
SCFD1-201ENST00000311943 DOLPP1Q86YN1 238 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 FUNDC1Q8IVP5 155 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 GPALPP1Q8IXQ4 340 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 FAM98AQ8NCA5 519 aaKnown RBP11□□□□□ -0.65
SCFD1-201ENST00000311943 OR5P2Q8WZ92 322 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 HSPBAP1Q96EW2 488 aa11□□□□□ -0.65
SCFD1-201ENST00000311943 AURKBQ96GD4 344 aaPredicted RBP11□□□□□ -0.65
SCFD1-201ENST00000311943 ZNF764Q96H86 408 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms