RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ELP5Q8TE02 316 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 THAP4Q8WY91 577 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 CIDECQ96AQ7 238 aaPredicted RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 MOCOSQ96EN8 888 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 VRK1Q99986 396 aaPredicted RBP7.78□□□□□ -1.16
VPS41-202ENST00000310301 DHDHQ9UQ10 334 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 CA5BQ9Y2D0 317 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 CASP8AP2Q9UKL3 1982 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 FER1L6Q2WGJ9 1857 aa7.78□□□□□ -1.16
VPS41-202ENST00000310301 SCDO00767 359 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 MITFO75030 526 aaPredicted RBP7.77□□□□□ -1.16
VPS41-202ENST00000310301 SLC22A5O76082 557 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 IGHEP01854 428 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 HBQ1P09105 142 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 CBSLP0DN79 551 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 RAB6AP20340 208 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 SSTR4P31391 388 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 PYCR1P32322 319 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 CBSP35520 551 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 MLLT3P42568 568 aaPredicted RBP7.77□□□□□ -1.16
VPS41-202ENST00000310301 ACTC1P68032 377 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 ACTA1P68133 377 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 MBTPS1Q14703 1052 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 CHRNA6Q15825 494 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 HNRNPA1L2Q32P51 320 aaKnown RBP7.77□□□□□ -1.16
VPS41-202ENST00000310301 PARM1Q6UWI2 310 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 PXKQ7Z7A4 578 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 ARHGAP12Q8IWW6 846 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 OR8J1Q8NGP2 316 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 TRMT10AQ8TBZ6 339 aaKnown RBP7.77□□□□□ -1.16
VPS41-202ENST00000310301 BORCS8Q96FH0 119 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 LRR1Q96L50 414 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 SIGLEC10Q96LC7 697 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 MYRFLQ96LU7 910 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 TWNKQ96RR1 684 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 OR51B5Q9H339 312 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 OR51J1Q9H342 316 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 MAGIXQ9H6Y5 334 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 SERINC1Q9NRX5 453 aa7.77□□□□□ -1.16
VPS41-202ENST00000310301 DNMT3AQ9Y6K1 912 aaPredicted RBP7.77□□□□□ -1.16
VPS41-202ENST00000310301 GRXCR2A6NFK2 248 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 UNC119BA6NIH7 251 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 E9PI62 339 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 AMY2AP04746 511 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 ACP5P13686 325 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 PITPNBP48739 271 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 CNIH2Q6PI25 160 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 PLXDC1Q8IUK5 500 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 FAM86B1Q8N7N1 296 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 KIAA1958Q8N8K9 716 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 PAPD5Q8NDF8 572 aaKnown RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 DGAT2Q96PD7 388 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 NPY6RQ99463 290 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 SLC17A9Q9BYT1 436 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 MYH8P13535 1937 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 CCDC163A0A0D9SF12 145 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 MTX2O75431 263 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 PDYNP01213 254 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 MAS1P04201 325 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 DCNP07585 359 aaKnown RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 BMP2P12643 396 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 S1PR1P21453 382 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 UQCRC2P22695 453 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 CHATP28329 748 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 DCST2Q5T1A1 773 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 KIAA0895LQ68EN5 471 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 KCTD20Q7Z5Y7 419 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 PAQR8Q8TEZ7 354 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 GON7Q9BXV9 100 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 XYLT2Q9H1B5 865 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 KCTD3Q9Y597 815 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 PTGDR2Q9Y5Y4 395 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 HYKKA2RU49 373 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 A8MUA0 341 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 TGM6O95932 706 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 SNRNP70P08621 437 aaKnown RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 OGDHQ02218 1023 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 NFATC4Q14934 902 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 SF3A2Q15428 464 aaKnown RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 PRRT3Q5FWE3 981 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 LYSMD3Q7Z3D4 306 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 TSPYL5Q86VY4 417 aaPredicted RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 METTL4Q8N3J2 472 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 DTWD2Q8NBA8 298 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 FAM83FQ8NEG4 500 aaPredicted RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 FRS2Q8WU20 508 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 LINC00597Q9H2U6 94 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 TAC3Q9UHF0 121 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 KCNS2Q9ULS6 477 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 TEX51A0A1B0GUA7 166 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 SMAD2Q15796 467 aaKnown RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 PTCHD3Q3KNS1 767 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 AGAP6Q5VW22 663 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 HACD2Q6Y1H2 254 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 CDHR3Q6ZTQ4 885 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 Q8N9G6 341 aaPredicted RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 WDR20Q8TBZ3 569 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 ARL5BQ96KC2 179 aa7.77□□□□□ -1.17
VPS41-202ENST00000310301 NSUN5Q96P11 429 aaKnown RBP7.77□□□□□ -1.17
VPS41-202ENST00000310301 AGAP4Q96P64 663 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms