RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 PCDHGA10Q9Y5H3 936 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 HRH3Q9Y5N1 445 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 TRAV17A0A0B4J275 112 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 A0A1W2PP18 115 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 C2orf72A6NCS6 295 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 ACOX3O15254 700 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 REM1O75628 298 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 PPM1BO75688 479 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 UQCRC2P22695 453 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 DNASE1L1P49184 302 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 MVDP53602 400 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 NRG3P56975 720 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 DCAF7P61962 342 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 MRPS22P82650 360 aaKnown RBP8.36□□□□□ -1.07
PDE4D-201ENST00000309641 RNFT1Q5M7Z0 435 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 SLC25A25Q6KCM7 469 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 FIGNL1Q6PIW4 674 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.36□□□□□ -1.07
PDE4D-201ENST00000309641 SULF2Q8IWU5 870 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 SLC34A3Q8N130 599 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 CISD2Q8N5K1 135 aaKnown RBP8.36□□□□□ -1.07
PDE4D-201ENST00000309641 HORMAD2Q8N7B1 307 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 POU5F2Q8N7G0 328 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 CDRT4Q8N9R6 151 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 NEURL3Q96EH8 262 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 ITCHQ96J02 903 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 OR7D2Q96RA2 312 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 ACTRT3Q9BYD9 372 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 NSRP1Q9H0G5 558 aaKnown RBP8.36□□□□□ -1.07
PDE4D-201ENST00000309641 VAPAQ9P0L0 249 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 CBLCQ9ULV8 474 aa8.36□□□□□ -1.07
PDE4D-201ENST00000309641 PRAMEF27A3QJZ7 478 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 SUV39H1O43463 412 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 NME2P1O60361 137 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 UNC5CO95185 931 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 SNRPB2P08579 225 aaKnown RBP8.35□□□□□ -1.07
PDE4D-201ENST00000309641 OR12D1P0DN82 309 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 CD46P15529 392 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 MATN1P21941 496 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 NME2P22392 152 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 CHI3L1P36222 383 aaPredicted RBP8.35□□□□□ -1.07
PDE4D-201ENST00000309641 FUT5Q11128 374 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 ZNHIT3Q15649 155 aaPredicted RBP8.35□□□□□ -1.07
PDE4D-201ENST00000309641 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.35□□□□□ -1.07
PDE4D-201ENST00000309641 CDC73Q6P1J9 531 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 ANGPTL8Q6UXH0 198 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 DLEU7Q6UYE1 221 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 RTL4Q6ZR62 310 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 MSANTD1Q6ZTZ1 278 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 SNX32Q86XE0 403 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 RNF130Q86XS8 419 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 HPS6Q86YV9 775 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 COX18Q8N8Q8 333 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 PAQR8Q8TEZ7 354 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 ZFP90Q8TF47 636 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 HGDQ93099 445 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 TMEM125Q96AQ2 219 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 SNRNP40Q96DI7 357 aaKnown RBP8.35□□□□□ -1.07
PDE4D-201ENST00000309641 SLC35G5Q96KT7 338 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 PHF12Q96QT6 1004 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 SLC39A3Q9BRY0 314 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 RTN4RQ9BZR6 473 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 MYLK2Q9H1R3 596 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 OR51I1Q9H343 314 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 IKZF5Q9H5V7 419 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 RMND5AQ9H871 391 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 IL1RL2Q9HB29 575 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 GALNT9Q9HCQ5 603 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 Q9N2J8 555 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 ASF1BQ9NVP2 202 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 CNOT11Q9UKZ1 510 aaKnown RBP8.35□□□□□ -1.07
PDE4D-201ENST00000309641 VPS4AQ9UN37 437 aa8.35□□□□□ -1.07
PDE4D-201ENST00000309641 FAF1Q9UNN5 650 aaPredicted RBP8.35□□□□□ -1.07
PDE4D-201ENST00000309641 TRBV5-3A0A0A0MS03 114 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 NPIPA5A0A0B4J1W7 369 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 TTLL8A6PVC2 850 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 B4DXG7 233 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 NPIPA7E9PJI5 369 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 ADAM10O14672 748 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 ICOSLGO75144 302 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 KCNK2O95069 426 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 ZIC2O95409 532 aaPredicted RBP8.34□□□□□ -1.07
PDE4D-201ENST00000309641 ANP32DO95626 131 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 ALOX5P09917 674 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 NPIPA8P0DM63 369 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 CYP4B1P13584 511 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 CASP3P42574 277 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 TRPC1P48995 793 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 PRIM2P49643 509 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 RNF144AP50876 292 aaPredicted RBP8.34□□□□□ -1.07
PDE4D-201ENST00000309641 CYP27C1Q4G0S4 372 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 LRIF1Q5T3J3 769 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 SLC22A10Q63ZE4 541 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 APOOLQ6UXV4 268 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 GOLM1Q8NBJ4 401 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 OR4C3Q8NH37 302 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 ADAMTS15Q8TE58 950 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 GRHL3Q8TE85 626 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 XAGE5Q8WWM1 108 aa8.34□□□□□ -1.07
PDE4D-201ENST00000309641 DIO2Q92813 273 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms