RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 H7C1C5 153 aa12□□□□□ -0.49
USP38-201ENST00000307017 ERVPABLB-1P60509 514 aa12□□□□□ -0.49
USP38-201ENST00000307017 LCN6P62502 163 aa12□□□□□ -0.49
USP38-201ENST00000307017 SMN1Q16637 294 aaKnown RBP12□□□□□ -0.49
USP38-201ENST00000307017 EIF5AL1Q6IS14 154 aaKnown RBP12□□□□□ -0.49
USP38-201ENST00000307017 HEPHL1Q6MZM0 1159 aa12□□□□□ -0.49
USP38-201ENST00000307017 METTL25Q8N6Q8 603 aa12□□□□□ -0.49
USP38-201ENST00000307017 CHDHQ8NE62 594 aaPredicted RBP12□□□□□ -0.49
USP38-201ENST00000307017 TTLQ8NG68 377 aa12□□□□□ -0.49
USP38-201ENST00000307017 SIGLEC10Q96LC7 697 aa12□□□□□ -0.49
USP38-201ENST00000307017 MMP27Q9H306 513 aa12□□□□□ -0.49
USP38-201ENST00000307017 NMNAT1Q9HAN9 279 aaPredicted RBP12□□□□□ -0.49
USP38-201ENST00000307017 ASB6Q9NWX5 421 aa12□□□□□ -0.49
USP38-201ENST00000307017 PPP6CO00743 305 aa12□□□□□ -0.49
USP38-201ENST00000307017 DBPQ10586 325 aaPredicted RBP12□□□□□ -0.49
USP38-201ENST00000307017 FXNQ16595 210 aa12□□□□□ -0.49
USP38-201ENST00000307017 ZNF695Q8IW36 515 aa12□□□□□ -0.49
USP38-201ENST00000307017 SLC35F2Q8IXU6 374 aa12□□□□□ -0.49
USP38-201ENST00000307017 ZNF808Q8N4W9 903 aaPredicted RBP12□□□□□ -0.49
USP38-201ENST00000307017 POC1BQ8TC44 478 aa12□□□□□ -0.49
USP38-201ENST00000307017 OR5B2Q96R09 309 aa12□□□□□ -0.49
USP38-201ENST00000307017 SLC29A1Q99808 456 aa12□□□□□ -0.49
USP38-201ENST00000307017 TXNRD2Q9NNW7 524 aa12□□□□□ -0.49
USP38-201ENST00000307017 OARD1Q9Y530 152 aa12□□□□□ -0.49
USP38-201ENST00000307017 SYNGR4O95473 234 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 CRISP1P54107 249 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 SPCS2Q15005 226 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 NRROSQ86YC3 692 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 ADGRF3Q8IZF5 1079 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 OR2T35Q8NGX2 323 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 SEC22AQ96IW7 307 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 NECTIN4Q96NY8 510 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 TSGA13Q96PP4 275 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 DPH7Q9BTV6 452 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.99□□□□□ -0.49
USP38-201ENST00000307017 FAM120CQ9NX05 1096 aaKnown RBP11.99□□□□□ -0.49
USP38-201ENST00000307017 A0A0B4J2A0 478 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 SLC34A2O95436 690 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 PAHP00439 452 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 ALDH3B2P48448 385 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 SFRP5Q5T4F7 317 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 KCNN1Q92952 543 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 SHPKQ9UHJ6 478 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 NME4O00746 187 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 SCAMP2O15127 329 aaKnown RBP11.99□□□□□ -0.49
USP38-201ENST00000307017 DUSP11O75319 330 aaKnown RBP11.99□□□□□ -0.49
USP38-201ENST00000307017 KLK3P07288 261 aaPredicted RBP11.99□□□□□ -0.49
USP38-201ENST00000307017 SPOCK1Q08629 439 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 OR4C11Q6IEV9 310 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 C2CD4CQ8TF44 421 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 TMEM19Q96HH6 336 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 RBP7Q96R05 134 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 MAPK3P27361 379 aaPredicted RBP11.99□□□□□ -0.49
USP38-201ENST00000307017 TMBIM6P55061 237 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 ARHGAP1Q07960 439 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 SERINC3Q13530 473 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 DOC2AQ14183 400 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 GRM7Q14831 915 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 LETMD1Q6P1Q0 360 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 OR8J1Q8NGP2 316 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 SNAPC3Q92966 411 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 ZNF486Q96H40 463 aaPredicted RBP11.99□□□□□ -0.49
USP38-201ENST00000307017 PHB2Q99623 299 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 TDP1Q9NUW8 608 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 CROCCQ5TZA2 2017 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 HTD2P86397 168 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 DPY19L1Q2PZI1 675 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 TMEM31Q5JXX7 168 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 CST9LP1Q5W188 147 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 TPRG1Q6ZUI0 275 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 OR13J1Q8NGT2 312 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 ARSGQ96EG1 525 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 C4orf36Q96KX1 117 aa11.99□□□□□ -0.49
USP38-201ENST00000307017 EDDM13A0A1B0GTR0 161 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 WASH4PA8MWX3 477 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 FGF18O76093 207 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 GALTP07902 379 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 TMEM205Q6UW68 189 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 TMPPEQ6ZT21 453 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 OLIG3Q7RTU3 272 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 PXKQ7Z7A4 578 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 VRK1Q99986 396 aaPredicted RBP11.98□□□□□ -0.49
USP38-201ENST00000307017 EFCAB11Q9BUY7 163 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 CD93Q9NPY3 652 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 PLCXD1Q9NUJ7 323 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 SERTAD3Q9UJW9 196 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 GPR34Q9UPC5 381 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 PCDHGB6Q9Y5F9 930 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 AGTR1P30556 359 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 RPS5P46782 204 aaKnown RBP11.98□□□□□ -0.49
USP38-201ENST00000307017 NPY5RQ15761 445 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 LEXMQ3ZCV2 418 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 C6orf89Q6UWU4 347 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 LBX2Q6XYB7 198 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 ZNF705AQ6ZN79 300 aaPredicted RBP11.98□□□□□ -0.49
USP38-201ENST00000307017 ALG8Q9BVK2 526 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 SIX4Q9UIU6 781 aa11.98□□□□□ -0.49
USP38-201ENST00000307017 BCAS1O75363 584 aaPredicted RBP11.98□□□□□ -0.49
USP38-201ENST00000307017 MC3RP41968 323 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms