RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 BRD7Q9NPI1 651 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 C1GALT1Q9NS00 363 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 TNFRSF10DQ9UBN6 386 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 ENTPD4Q9Y227 616 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 KCNE3Q9Y6H6 103 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 MED12Q93074 2177 aa13.73□□□□□ -0.21
PTPN9-201ENST00000306726 GTPBP1O00178 669 aaKnown RBP13.72□□□□□ -0.21
PTPN9-201ENST00000306726 EIF3FO00303 357 aaPredicted RBP13.72□□□□□ -0.21
PTPN9-201ENST00000306726 PGRMC2O15173 223 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 NDUFS4O43181 175 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 RLN1P04808 185 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 GIFP27352 417 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 MAPK8P45983 427 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 POU6F2P78424 691 aaPredicted RBP13.72□□□□□ -0.21
PTPN9-201ENST00000306726 MAB21L1Q13394 359 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 EFR3AQ14156 821 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 C6orf132Q5T0Z8 1188 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 CCDC28AQ8IWP9 274 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 AP3S1Q92572 193 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 GPA33Q99795 319 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 GSDMCQ9BYG8 508 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 SRRQ9GZT4 340 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 FZD3Q9NPG1 666 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 SLC23A1Q9UHI7 598 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 NAALAD2Q9Y3Q0 740 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 SLC31A1O15431 190 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 VIPR2P41587 438 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 SLC6A12P48065 614 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 SOX9P48436 509 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 FAPQ12884 760 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 GRHL2Q6ISB3 625 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 LINGO2Q7L985 606 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 OR2A12Q8NGT7 310 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 DPH1Q9BZG8 443 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 ZCCHC2Q9C0B9 1178 aaKnown RBP13.72□□□□□ -0.21
PTPN9-201ENST00000306726 CCDC86Q9H6F5 360 aaKnown RBP13.72□□□□□ -0.21
PTPN9-201ENST00000306726 ISG20L2Q9H9L3 353 aaKnown RBP13.72□□□□□ -0.21
PTPN9-201ENST00000306726 MYEF2Q9P2K5 600 aaKnown RBP13.72□□□□□ -0.21
PTPN9-201ENST00000306726 ING4Q9UNL4 249 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 LALBAP00709 142 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 SCG5P05408 212 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 NTSP30990 170 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 SOX2P48431 317 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 TAP2Q03519 686 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 SYT14P1Q58G82 188 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 OR9A1PQ8NGU1 263 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 OR6K6Q8NGW6 343 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 ADAMTS15Q8TE58 950 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 SMPDL3AQ92484 453 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 ZBED6CLQ96FA7 236 aaPredicted RBP13.72□□□□□ -0.21
PTPN9-201ENST00000306726 RDH14Q9HBH5 336 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 THSD1Q9NS62 852 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 RDH8Q9NYR8 311 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 ERVW-1Q9UQF0 538 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 PADI2Q9Y2J8 665 aa13.72□□□□□ -0.21
PTPN9-201ENST00000306726 TSPAN9O75954 239 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 KDM4BO94953 1096 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 CSN2P05814 226 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 EPCAMP16422 314 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 XCR1P46094 333 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 SLC27A4Q6P1M0 643 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 CEACAM19Q7Z692 300 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 PARGQ86W56 976 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 NATD1Q8N6N6 113 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 GPR32P1Q8NGA4 272 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 WDR20Q8TBZ3 569 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 OR6C2Q9NZP2 312 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 RASD1Q9Y272 281 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 KCNE1BA0A087WTH5 132 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 SIGLEC5O15389 551 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 CBSLP0DN79 551 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 CBSP35520 551 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 CRYBB2P43320 205 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 GCGRP47871 477 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 FNTBP49356 437 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 WNT4P56705 351 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 SLC7A9P82251 487 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 SIGLEC14Q08ET2 396 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 CDC20Q12834 499 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 GPR50Q13585 617 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 KCNC3Q14003 757 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 NTRK2Q16620 822 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 TCEAL5Q5H9L2 206 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 PGBD2Q6P3X8 592 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 FIGNL1Q6PIW4 674 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 TMC8Q8IU68 726 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 OTUB2Q96DC9 234 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 SATB2Q9UPW6 733 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 MGAT4BQ9UQ53 548 aa13.71□□□□□ -0.21
PTPN9-201ENST00000306726 EXO1Q9UQ84 846 aaKnown RBP13.71□□□□□ -0.21
PTPN9-201ENST00000306726 COLQQ9Y215 455 aaPredicted RBP13.71□□□□□ -0.21
PTPN9-201ENST00000306726 AK6Q9Y3D8 172 aaKnown RBP13.71□□□□□ -0.21
PTPN9-201ENST00000306726 TNFRSF10AO00220 468 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 MID1O15344 667 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 CDC123O75794 336 aaPredicted RBP13.71□□□□□ -0.22
PTPN9-201ENST00000306726 OLFM2O95897 454 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 BMP7P18075 431 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 PRKACBP22694 351 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 UGT2B10P36537 528 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 OR3A3P47888 321 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms