RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 C1orf226A1L170 272 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PI15O43692 258 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 OR1F1O43749 312 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 MT-ND5P03915 603 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PRPH2P23942 346 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 MMP12P39900 470 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 TPBGQ13641 420 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PRPF38BQ5VTL8 546 aaKnown RBP12.3□□□□□ -0.44
TRIM35-201ENST00000305364 CD276Q5ZPR3 534 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PLBD1Q6P4A8 553 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PRSS42Q7Z5A4 293 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 SIAH3Q8IW03 269 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 METTL2AQ96IZ6 378 aaKnown RBP12.3□□□□□ -0.44
TRIM35-201ENST00000305364 ATF6BQ99941 703 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PRR14Q9BWN1 585 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 RETREG1Q9H6L5 497 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 PCM1Q15154 2024 aa12.3□□□□□ -0.44
TRIM35-201ENST00000305364 TRIP12Q14669 1992 aaPredicted RBP12.3□□□□□ -0.44
TRIM35-201ENST00000305364 TMEM129A0AVI4 362 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 FZD7O75084 574 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 IGLV3-27P01718 113 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 CD22P20273 847 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 GPR1P46091 355 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 KHKP50053 298 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 GATMP50440 423 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 TGM3Q08188 693 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 PRAMEF14Q5SWL7 426 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 PRAMEF13Q5VWM6 474 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 UBE2Q1Q7Z7E8 422 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 MMP21Q8N119 569 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF527Q8NB42 609 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 TREX2Q9BQ50 279 aaPredicted RBP12.29□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF436Q9C0F3 470 aaPredicted RBP12.29□□□□□ -0.44
TRIM35-201ENST00000305364 MTG2Q9H4K7 406 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 DMRT3Q9NQL9 472 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 KCNE1BA0A087WTH5 132 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 H7C2Y5 167 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 KIAA1024LP59773 190 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 ADAMTS15Q8TE58 950 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 SNX33Q8WV41 574 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 IL17FQ96PD4 163 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 DDOQ99489 341 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 SLC25A19Q9HC21 320 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 FLRT2O43155 660 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 RAB3BP20337 219 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 MPPE1Q53F39 396 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 RNF165Q6ZSG1 346 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 ZER1Q7Z7L7 766 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 CMTM8Q8IZV2 173 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 GJD3Q8N144 294 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 LILRA3Q8N6C8 439 aaPredicted RBP12.29□□□□□ -0.44
TRIM35-201ENST00000305364 WDR20Q8TBZ3 569 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 CD99L2Q8TCZ2 262 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 MED18Q9BUE0 208 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 C1QTNF6Q9BXI9 259 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 OR2AG1Q9H205 316 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 MYO7AQ13402 2215 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 PRAMEF4O60810 478 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 F11P03951 625 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 C8orf89P0DMQ9 161 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 HK1P19367 917 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 TCTE1Q5JU00 501 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 PRAMEF9Q5VWM5 478 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF740Q8NDX6 193 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 OR2T33Q8NG76 320 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 ING5Q8WYH8 240 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 ALG8Q9BVK2 526 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 C1QTNF7Q9BXJ2 289 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 SLC6A15Q9H2J7 730 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 SDHAF2Q9NX18 166 aa12.29□□□□□ -0.44
TRIM35-201ENST00000305364 GTPBP1O00178 669 aaKnown RBP12.28□□□□□ -0.44
TRIM35-201ENST00000305364 GABRR2P28476 465 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 AHRP35869 848 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 LMAN2Q12907 356 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 SLC22A10Q63ZE4 541 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 HBMQ6B0K9 141 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF783Q6ZMS7 281 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 OR5M3Q8NGP4 307 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 SFXN2Q96NB2 322 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 SLITRK2Q9H156 845 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 TAS2R10Q9NYW0 307 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 TAC3Q9UHF0 121 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 PTPRZ1P23471 2315 aaPredicted RBP12.28□□□□□ -0.44
TRIM35-201ENST00000305364 ARPC1BO15143 372 aaKnown RBP12.28□□□□□ -0.44
TRIM35-201ENST00000305364 HRO43593 1189 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 FMO6PO60774 539 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 UBXN7O94888 489 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 CKBP12277 381 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 TMEM115Q12893 351 aaPredicted RBP12.28□□□□□ -0.44
TRIM35-201ENST00000305364 CRHR2Q13324 411 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 PUM1Q14671 1186 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRIM35-201ENST00000305364 NDUFAF5Q5TEU4 345 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 SAMD11Q96NU1 681 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 TMEM175Q9BSA9 504 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 PDCD10Q9BUL8 212 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 MYNNQ9NPC7 610 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 KLHL42Q9P2K6 505 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 hCG_1807616A0A1W2PRN6 198 aa12.28□□□□□ -0.44
TRIM35-201ENST00000305364 RIIAD1A6NNX1 92 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms