RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 APOL4Q9BPW4 351 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 CXorf56Q9H5V9 222 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 GAREM1Q9H706 876 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 NECTIN3Q9NQS3 549 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 ATXN7L1Q9ULK2 861 aaPredicted RBP20.76■□□□□ 0.91
SMAD1-201ENST00000302085 SATB2Q9UPW6 733 aa20.76■□□□□ 0.91
SMAD1-201ENST00000302085 GXYLT2A0PJZ3 443 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 FRS3O43559 492 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 TPST2O60704 377 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 STT3AP46977 705 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 SGCDQ92629 289 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 DGAT2Q96PD7 388 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 FNDC11Q9BVV2 318 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 SAP130Q9H0E3 1048 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF556Q9HAH1 456 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 MAN2C1Q9NTJ4 1040 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 DHCR7Q9UBM7 475 aaKnown RBP20.75■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF443Q9Y2A4 671 aaPredicted RBP20.75■□□□□ 0.91
SMAD1-201ENST00000302085 IFT52Q9Y366 437 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 PCDHGA6Q9Y5G7 932 aa20.75■□□□□ 0.91
SMAD1-201ENST00000302085 CENPVL1A0A0U1RR11 272 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 A0A1W2PRQ8 180 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 AGAP5A6NIR3 686 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 FAAHO00519 579 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 NKX2-2O95096 273 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 SSTR4P31391 388 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 EMDP50402 254 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 TOP3AQ13472 1001 aaPredicted RBP20.74■□□□□ 0.91
SMAD1-201ENST00000302085 SQSTM1Q13501 440 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 DGCR6Q14129 220 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 GPR68Q15743 365 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 LAIR1Q6GTX8 287 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 TMEM71Q6P5X7 295 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 RBM44Q6ZP01 1051 aaKnown RBP20.74■□□□□ 0.91
SMAD1-201ENST00000302085 PEX5LQ8IYB4 626 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 OR2I1PQ8NGU4 316 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 SLC7A13Q8TCU3 470 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 PRRC1Q96M27 445 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF768Q9H5H4 540 aaKnown RBP20.74■□□□□ 0.91
SMAD1-201ENST00000302085 LANCL2Q9NS86 450 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 NDOR1Q9UHB4 597 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 SLC13A4Q9UKG4 626 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 PATE3B3GLJ2 98 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 COQ9O75208 318 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 STX11O75558 287 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 UGT2B17O75795 530 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 OXSR1O95747 527 aaPredicted RBP20.74■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF155Q12901 538 aaPredicted RBP20.74■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF267Q14586 743 aaPredicted RBP20.74■□□□□ 0.91
SMAD1-201ENST00000302085 PODNL1Q6PEZ8 512 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 KLHL17Q6TDP4 642 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 RBM38Q9H0Z9 239 aaKnown RBP20.74■□□□□ 0.91
SMAD1-201ENST00000302085 TRIM45Q9H8W5 580 aaPredicted RBP20.74■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF232Q9UNY5 417 aa20.74■□□□□ 0.91
SMAD1-201ENST00000302085 SH3PXD2BA1X283 911 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 TMEM221A6NGB7 291 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 CLDN24A6NM45 220 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 M0R296 226 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 MSL3P1P0C860 447 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 EEF1B2P24534 225 aaKnown RBP20.73■□□□□ 0.91
SMAD1-201ENST00000302085 MAD2L1BPQ15013 274 aaPredicted RBP20.73■□□□□ 0.91
SMAD1-201ENST00000302085 MAPK14Q16539 360 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 FIGNL1Q6PIW4 674 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF773Q6PK81 442 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF836Q6ZNA1 936 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF619Q8N2I2 560 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 PARP8Q8N3A8 854 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 FAM181AQ8N9Y4 354 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 DTWD2Q8NBA8 298 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 ZNF501Q96CX3 271 aaPredicted RBP20.73■□□□□ 0.91
SMAD1-201ENST00000302085 DGCR14Q96DF8 476 aaKnown RBP20.73■□□□□ 0.91
SMAD1-201ENST00000302085 MVB12AQ96EY5 273 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 LMF2Q9BU23 707 aaKnown RBP20.73■□□□□ 0.91
SMAD1-201ENST00000302085 YIPF2Q9BWQ6 316 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 FOLH1BQ9HBA9 442 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 CAPN10Q9HC96 672 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 CTPS2Q9NRF8 586 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 KCNE5Q9UJ90 142 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 SERTAD3Q9UJW9 196 aa20.73■□□□□ 0.91
SMAD1-201ENST00000302085 SLC1A7O00341 560 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 RPS4Y1P22090 263 aaKnown RBP20.72■□□□□ 0.91
SMAD1-201ENST00000302085 GGT2P36268 569 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 POU6F2P78424 691 aaPredicted RBP20.72■□□□□ 0.91
SMAD1-201ENST00000302085 CCL7P80098 99 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 PSG6Q00889 435 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 ZC3H14Q6PJT7 736 aaKnown RBP20.72■□□□□ 0.91
SMAD1-201ENST00000302085 B3GNT8Q7Z7M8 397 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 EID2Q8N6I1 236 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 BPIFB6Q8NFQ5 453 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 FGF21Q9NSA1 209 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 HEMK1Q9Y5R4 338 aaPredicted RBP20.72■□□□□ 0.91
SMAD1-201ENST00000302085 ADAMTS9Q9P2N4 1935 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 A0A1W2PQM1 296 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 FMO3P31513 532 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 EEF1A1P68104 462 aaKnown RBP20.72■□□□□ 0.91
SMAD1-201ENST00000302085 HOXC5Q00444 222 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 LARS2Q15031 903 aaKnown RBP20.72■□□□□ 0.91
SMAD1-201ENST00000302085 CNPY1Q3B7I2 92 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 AP1ARQ63HQ0 302 aa20.72■□□□□ 0.91
SMAD1-201ENST00000302085 PGBD2Q6P3X8 592 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms