RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 SYNPO2LQ9H987 977 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 PAK6Q9NQU5 681 aaPredicted RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 ACOXLQ9NUZ1 547 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 IMP3Q9NV31 184 aaKnown RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 AHSPQ9NZD4 102 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 SLC9A8Q9Y2E8 581 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 MRPS7Q9Y2R9 242 aaKnown RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 A0A0B4J203 849 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 TNFRSF10AO00220 468 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 QSOX1O00391 747 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 ZNF780AO75290 641 aaPredicted RBP12.71□□□□□ -0.37
CTTN-201ENST00000301843 SCO1O75880 301 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 ACP2P11117 423 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 PPP2R1BP30154 601 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 UQCRC1P31930 480 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 VIPR2P41587 438 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 CDK5Q00535 292 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.37
CTTN-201ENST00000301843 NRMQ8IXM6 262 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 CLDN22Q8N7P3 220 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 LINC01555Q8NAE3 123 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 ZNF296Q8WUU4 475 aaPredicted RBP12.71□□□□□ -0.37
CTTN-201ENST00000301843 DACT3Q96B18 629 aaPredicted RBP12.71□□□□□ -0.37
CTTN-201ENST00000301843 WDR34Q96EX3 536 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 SAGE1Q9NXZ1 904 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 GSTK1Q9Y2Q3 226 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 ATG4BQ9Y4P1 393 aa12.71□□□□□ -0.37
CTTN-201ENST00000301843 ARRDC5A6NEK1 342 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 REM1O75628 298 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 PDE9AO76083 593 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 ACP5P13686 325 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 MC3RP41968 323 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 RPS5P46782 204 aaKnown RBP12.71□□□□□ -0.38
CTTN-201ENST00000301843 GNG2P59768 71 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 ERVFC1P60507 584 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 E2F2Q14209 437 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 ZNF311Q5JNZ3 666 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 C9orf64Q5T6V5 341 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 BCL2L15Q5TBC7 163 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 FAM205BPQ63HN1 556 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 RPTNQ6XPR3 784 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 SIRT6Q8N6T7 355 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 SLC37A3Q8NCC5 494 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 GRPEL2Q8TAA5 225 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 TMEM163Q8TC26 289 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 TMEM255BQ8WV15 326 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 QRFPRQ96P65 431 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 AIF1LQ9BQI0 150 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 MCOLN1Q9GZU1 580 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 ENKD1Q9H0I2 346 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 ZBP1Q9H171 429 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 OR52A5Q9H2C5 316 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 PPP1R3EQ9H7J1 279 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 EXTL2Q9UBQ6 330 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 SLC23A1Q9UHI7 598 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 ICKQ9UPZ9 632 aa12.71□□□□□ -0.38
CTTN-201ENST00000301843 CACNA1IQ9P0X4 2223 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 A0A1W2PRQ8 180 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 OTOL1A6NHN0 477 aaPredicted RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 OR52A4PA6NMU1 304 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 PRODHO43272 600 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 ERI3O43414 337 aaKnown RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 AKAP8O43823 692 aaKnown RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 MOSPD3O75425 235 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 OR2B3O76000 313 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 UBXN7O94888 489 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 ALPPP05187 535 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 PRMT2P55345 433 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 KLHL12Q53G59 568 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 LILRA6Q6PI73 481 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 SLC36A4Q6YBV0 504 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 ESPNLQ6ZVH7 1005 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 NUDT13Q86X67 352 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 CPOQ8IVL8 374 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 OR4N5Q8IXE1 308 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 BEST4Q8NFU0 473 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 COQ10AQ96MF6 247 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 CAPN10Q9HC96 672 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 NEUROD4Q9HD90 331 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 KLHL1Q9NR64 748 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 MAT2BQ9NZL9 334 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 PTGFRNQ9P2B2 879 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 NDOR1Q9UHB4 597 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 KCNK6Q9Y257 313 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 AP1M2Q9Y6Q5 423 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 FKTNO75072 461 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 RHOP08100 348 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 TFPIP10646 304 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 ARSBP15848 533 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 POU3F3P20264 500 aaPredicted RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 ITGB8P26012 769 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 SMUG1Q53HV7 270 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 CCNJQ5T5M9 372 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 GRASPQ7Z6J2 395 aaPredicted RBP12.7□□□□□ -0.38
CTTN-201ENST00000301843 AMZ2Q86W34 360 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 OR6C4Q8NGE1 309 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 OR9A2Q8NGT5 310 aa12.7□□□□□ -0.38
CTTN-201ENST00000301843 CLIP3Q96DZ5 547 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms