RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SCD5Q86SK9 330 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 IQCHQ86VS3 1027 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 CMIPQ8IY22 773 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 TMEM185AQ8NFB2 350 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 OR5M1Q8NGP8 315 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 TRMT10AQ8TBZ6 339 aaKnown RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 ACOT12Q8WYK0 555 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 ZNF582Q96NG8 517 aaPredicted RBP13.59□□□□□ -0.23
CDT1-201ENST00000301019 TAS2R7Q9NYW3 318 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 CNIH4Q9P003 139 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 MIOXQ9UGB7 285 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 TINAGQ9UJW2 476 aa13.59□□□□□ -0.23
CDT1-201ENST00000301019 SCN2BO60939 215 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 RP2O75695 350 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 EPHX1P07099 455 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 ADH7P40394 386 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 TBX4P57082 545 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 RPS24P62847 133 aaKnown RBP13.58□□□□□ -0.23
CDT1-201ENST00000301019 DOC2AQ14183 400 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 TAF1CQ15572 869 aaPredicted RBP13.58□□□□□ -0.23
CDT1-201ENST00000301019 GPR33Q49SQ1 333 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 TIGD5Q53EQ6 642 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 ZNF385BQ569K4 471 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 SMARCD3Q6STE5 483 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 TRIM46Q7Z4K8 759 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 VPS37AQ8NEZ2 397 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 OR1S1Q8NH92 325 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 ELP4Q96EB1 424 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 GPA33Q99795 319 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 NT5DC2Q9H857 520 aa13.58□□□□□ -0.23
CDT1-201ENST00000301019 ANKDD1BA6NHY2 528 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 PTGESO14684 152 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 MRPL3P09001 348 aaKnown RBP13.58□□□□□ -0.24
CDT1-201ENST00000301019 CTSHP09668 335 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 OSMP13725 252 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 NFYBP25208 207 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 RGS4P49798 205 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 CAPZA1P52907 286 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 MEF2AQ02078 507 aaPredicted RBP13.58□□□□□ -0.24
CDT1-201ENST00000301019 LINGO2Q7L985 606 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 OR51G2Q8NGK0 314 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.24
CDT1-201ENST00000301019 RPS6KB2Q9UBS0 482 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 AP1M2Q9Y6Q5 423 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 A8MXK9 166 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 SGK494L7N484 410 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 SLC2A10O95528 541 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 SRPRAP08240 638 aaKnown RBP13.58□□□□□ -0.24
CDT1-201ENST00000301019 DRD2P14416 443 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 E2F1Q01094 437 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 IRF8Q02556 426 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 TGIF1Q15583 401 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 DCAF4L1Q3SXM0 396 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 XKR6Q5GH73 641 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 SLC30A6Q6NXT4 461 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 OR8J1Q8NGP2 316 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 SLC7A13Q8TCU3 470 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 PGAP3Q96FM1 320 aaPredicted RBP13.58□□□□□ -0.24
CDT1-201ENST00000301019 OR2M2Q96R28 347 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 PELOQ9BRX2 385 aaKnown RBP13.58□□□□□ -0.24
CDT1-201ENST00000301019 C20orf85Q9H1P6 137 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 MBD1Q9UIS9 605 aaPredicted RBP13.58□□□□□ -0.24
CDT1-201ENST00000301019 DHRS7Q9Y394 339 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 CSNK1G3Q9Y6M4 447 aa13.58□□□□□ -0.24
CDT1-201ENST00000301019 NYNRINQ9P2P1 1898 aaKnown RBP13.57□□□□□ -0.24
CDT1-201ENST00000301019 SLC9B1P1A6NJY1 282 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 D6RAR5 112 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 AIPO00170 330 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 ADAM11O75078 769 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 FZD7O75084 574 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 FGF18O76093 207 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 RLN1P04808 185 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 PRPS1L1P21108 318 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 CLDN12P56749 244 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 STXBP1P61764 594 aaKnown RBP13.57□□□□□ -0.24
CDT1-201ENST00000301019 RBM39Q14498 530 aaKnown RBP13.57□□□□□ -0.24
CDT1-201ENST00000301019 SPIN4Q56A73 249 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 C10orf120Q5SQS8 335 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 PRAMEF13Q5VWM6 474 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 RNF180Q86T96 592 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 NPAS3Q8IXF0 933 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 SFT2D1Q8WV19 159 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 MAP3K3Q99759 626 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 MED20Q9H944 212 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 TMEM138Q9NPI0 162 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 POT1Q9NUX5 634 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 ASH2LQ9UBL3 628 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 SF3B6Q9Y3B4 125 aaKnown RBP13.57□□□□□ -0.24
CDT1-201ENST00000301019 CPSF4LA6NMK7 179 aaKnown RBP13.57□□□□□ -0.24
CDT1-201ENST00000301019 SULT1C2O00338 296 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 LGI1O95970 557 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 SULT1A3P0DMM9 295 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 SULT1A4P0DMN0 295 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 PTAFRP25105 342 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 SLC36A2Q495M3 483 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 FRG2Q64ET8 278 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 RBFAQ8N0V3 343 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 C2orf73Q8N5S3 287 aaPredicted RBP13.57□□□□□ -0.24
CDT1-201ENST00000301019 EID2BQ96D98 161 aa13.57□□□□□ -0.24
CDT1-201ENST00000301019 FRG2BQ96QU4 278 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms