RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 NPPBP16860 134 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 AHRP35869 848 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 RECQLP46063 649 aaPredicted RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 LASP1Q14847 261 aaKnown RBP13.8□□□□□ -0.2
COL6A2-201ENST00000300527 PIP5KL1Q5T9C9 394 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 SYT17Q9BSW7 474 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 GSDMCQ9BYG8 508 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 SLCO1C1Q9NYB5 712 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 CHST2Q9Y4C5 530 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 MAB21L2Q9Y586 359 aa13.8□□□□□ -0.2
COL6A2-201ENST00000300527 TMEM129A0AVI4 362 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 NPIPB8E9PQR5 432 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 SGK494L7N484 410 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 HMGN4O00479 90 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 SIGLEC5O15389 551 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 HYAL3O43820 417 aaPredicted RBP13.79□□□□□ -0.2
COL6A2-201ENST00000300527 SLC19A2O60779 497 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 H2AFB2P0C5Z0 115 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 C8orf89P0DMQ9 161 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 ACP5P13686 325 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 TRIM23P36406 574 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 SIGLEC14Q08ET2 396 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 GRIN2CQ14957 1233 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 ST3GAL2Q16842 350 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 KIAA1324Q6UXG2 1013 aaKnown RBP13.79□□□□□ -0.2
COL6A2-201ENST00000300527 CPOQ8IVL8 374 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 MS4A15Q8N5U1 240 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 FBXO15Q8NCQ5 510 aaPredicted RBP13.79□□□□□ -0.2
COL6A2-201ENST00000300527 GOT1L1Q8NHS2 421 aaPredicted RBP13.79□□□□□ -0.2
COL6A2-201ENST00000300527 SORCS1Q8WY21 1168 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 OR51V1Q9H2C8 321 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 C12orf10Q9HB07 376 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 B4GALT2O60909 372 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 ATG13O75143 517 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 MAPK8P45983 427 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 TAP2Q03519 686 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 DSG2Q14126 1118 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 PLA1AQ53H76 456 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 FCRLBQ6BAA4 426 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 RPTNQ6XPR3 784 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 CEACAM19Q7Z692 300 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 ZNF687Q8N1G0 1237 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 BMPERQ8N8U9 685 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 SMPDL3AQ92484 453 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 RBP7Q96R05 134 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 KCNJ15Q99712 375 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 MACROD1Q9BQ69 325 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 TRMT61BQ9BVS5 477 aaKnown RBP13.79□□□□□ -0.2
COL6A2-201ENST00000300527 OR10A4Q9H209 315 aa13.79□□□□□ -0.2
COL6A2-201ENST00000300527 A0A087WUU8 490 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 A0A1W2PRG6 482 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ZNF821O75541 412 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-201ENST00000300527 UBXN7O94888 489 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 EOMESO95936 686 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 HLA-DQB1P01920 261 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 SNRPBP14678 240 aaKnown RBP13.78□□□□□ -0.2
COL6A2-201ENST00000300527 LCN1P31025 176 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 RPL3P39023 403 aaKnown RBP13.78□□□□□ -0.2
COL6A2-201ENST00000300527 CLCNKAP51800 687 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 SLC25A35Q3KQZ1 300 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 GPR139Q6DWJ6 353 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 C22orf39Q6P5X5 142 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 TMEM81Q6P7N7 255 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 METAP1DQ6UB28 335 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-201ENST00000300527 PRSS42Q7Z5A4 293 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 OR13C5Q8NGS8 318 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 SLC35G5Q96KT7 338 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 MYNNQ9NPC7 610 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 NANSQ9NR45 359 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 SIRT4Q9Y6E7 314 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-201ENST00000300527 AP1M2Q9Y6Q5 423 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 SLC9B1P1A6NJY1 282 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 CKBP12277 381 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ICAM2P13598 275 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 PCSK2P16519 638 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 AHCYP23526 432 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 COL28A1Q2UY09 1125 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 MINDY4Q4G0A6 757 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 PLBD1Q6P4A8 553 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 FAM122CQ6P4D5 195 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ALKAL2Q6UX46 152 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 SLC5A11Q8WWX8 675 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ST8SIA4Q92187 359 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 HSD17B8Q92506 261 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 FBXW5Q969U6 566 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ELMOD3Q96FG2 381 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 NT5DC2Q9H857 520 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 HEXA-AS1Q9H8Q6 139 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ERVMER34-1Q9H9K5 563 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ARRDC5A6NEK1 342 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 OR5K3A6NET4 321 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 GPR171O14626 319 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 PPM1DO15297 605 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 MMP20O60882 483 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 SELENOPP49908 381 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 KIAA1024LP59773 190 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 OC90Q02509 493 aaPredicted RBP13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ELOAQ14241 798 aaKnown RBP13.78□□□□□ -0.2
COL6A2-201ENST00000300527 ZNF750Q32MQ0 723 aa13.78□□□□□ -0.2
COL6A2-201ENST00000300527 DNAJB7Q7Z6W7 309 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms