RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 OR5H15A6NDH6 313 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 SGK494L7N484 410 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 CYR61O00622 381 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 RDH16O75452 317 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 GMNNO75496 209 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 B3GALT4O96024 378 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 EMP2P54851 167 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 MTPNP58546 118 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 AP2B1P63010 937 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 ABHD17BQ5VST6 288 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 MMP21Q8N119 569 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 FAM156AQ8NDB6 213 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 FAM120BQ96EK7 910 aaKnown RBP19.49■□□□□ 0.71
SMCO4-201ENST00000298966 AMDHD1Q96NU7 426 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 SPOCK3Q9BQ16 436 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 ACTR3BQ9P1U1 418 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 MAGEL2Q9UJ55 1249 aa19.49■□□□□ 0.71
SMCO4-201ENST00000298966 A0A0A6YYC8 382 aaPredicted RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 I3L1I5 382 aaPredicted RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 CLDN4O14493 209 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 PGRMC2O15173 223 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 CHST10O43529 356 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 ERAL1O75616 437 aaKnown RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 KRT36O76013 467 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 GSNP06396 782 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 TCN1P20061 433 aaPredicted RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 FBLP22087 321 aaKnown RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 ANXA11P50995 505 aaKnown RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 PMP22Q01453 160 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 RCN1Q15293 331 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 MTX3Q5HYI7 312 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 LCN8Q6JVE9 175 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 ZFP1Q6P2D0 407 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 PRSS41Q7RTY9 318 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 LRRC25Q8N386 305 aaPredicted RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 BHLHE22Q8NFJ8 381 aaPredicted RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 OR2T12Q8NG77 320 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 OR52N2Q8NGI0 321 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 REXO5Q96IC2 774 aaKnown RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 ZNF681Q96N22 645 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 OR1F2PQ96R84 312 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 SLC35A5Q9BS91 424 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 S100A14Q9HCY8 104 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 THUMPD1Q9NXG2 353 aaKnown RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 STX18Q9P2W9 335 aaKnown RBP19.48■□□□□ 0.71
SMCO4-201ENST00000298966 SNX13Q9Y5W8 968 aa19.48■□□□□ 0.71
SMCO4-201ENST00000298966 NIPBLQ6KC79 2804 aaeCLIP19.47■□□□□ 0.71
SMCO4-201ENST00000298966 IGLV3-12A0A075B6K2 115 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 IGHV1-45A0A0A0MS14 117 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 A0A1W2PQ72 361 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 ZNF860A6NHJ4 632 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 IDSB3KWA1 339 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 GPR75O95800 540 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 C8BP07358 591 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 CELA2AP08217 269 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 HOXB6P17509 224 aaKnown RBP19.47■□□□□ 0.71
SMCO4-201ENST00000298966 GPC1P35052 558 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 MSX2P35548 267 aaPredicted RBP19.47■□□□□ 0.71
SMCO4-201ENST00000298966 NCBP2P52298 156 aaKnown RBP eCLIP19.47■□□□□ 0.71
SMCO4-201ENST00000298966 GTF3C1Q12789 2109 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 DSG2Q14126 1118 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 SELPLGQ14242 412 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 PRSS53Q2L4Q9 553 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 GTDC1Q4AE62 458 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 DHFR2Q86XF0 187 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 CALHM3Q86XJ0 350 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 OR52E4Q8NGH9 312 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 SLC26A7Q8TE54 656 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 MMABQ96EY8 250 aaPredicted RBP19.47■□□□□ 0.71
SMCO4-201ENST00000298966 CNRIP1Q96F85 164 aaPredicted RBP19.47■□□□□ 0.71
SMCO4-201ENST00000298966 LRGUKQ96M69 825 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 ZNF583Q96ND8 569 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 PELOQ9BRX2 385 aaKnown RBP19.47■□□□□ 0.71
SMCO4-201ENST00000298966 YIPF2Q9BWQ6 316 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 GLIPR2Q9H4G4 154 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 SLC6A13Q9NSD5 602 aa19.47■□□□□ 0.71
SMCO4-201ENST00000298966 ELOVL7A1L3X0 281 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 AQP12BA6NM10 295 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 MED26O95402 600 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 ITGAMP11215 1152 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 CHI3L1P36222 383 aaPredicted RBP19.46■□□□□ 0.71
SMCO4-201ENST00000298966 HSD17B7P56937 341 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 OLR1P78380 273 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 PRR5P85299 388 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 RBBP4Q09028 425 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 CDSNQ15517 529 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 LAPTM4BQ86VI4 370 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 SLC30A8Q8IWU4 369 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 AQP12AQ8IXF9 295 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 OR56A1Q8NGH5 318 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 OR10A6Q8NH74 314 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 TBC1D20Q96BZ9 403 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 NEURL3Q96EH8 262 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 DUS3LQ96G46 650 aaKnown RBP19.46■□□□□ 0.71
SMCO4-201ENST00000298966 PCDHAC1Q9H158 963 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 C3orf14Q9HBI5 128 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 TEKT2Q9UIF3 430 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 MEMO1Q9Y316 297 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 MMACHCQ9Y4U1 282 aa19.46■□□□□ 0.71
SMCO4-201ENST00000298966 RNF103-CHMP3A0A140T963 221 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms