RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 BTBD2Q9BX70 525 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 ADAP2Q9NPF8 381 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 CTPS2Q9NRF8 586 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 CHST2Q9Y4C5 530 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 DSPPQ9NZW4 1301 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 ADAMTS20P59510 1910 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 H3BMQ9 156 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 ASNA1O43681 348 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 ATE1O95260 518 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 LGI1O95970 557 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 ATP1B1P05026 303 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 H1F0P07305 194 aaKnown RBP19.92■□□□□ 0.78
SOX17-201ENST00000297316 FOLR1P15328 257 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 BTG2P78543 158 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 LSM11P83369 360 aaKnown RBP eCLIP19.92■□□□□ 0.78
SOX17-201ENST00000297316 FHL5Q5TD97 284 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 TMEM236Q5W0B7 351 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 COG8Q96MW5 612 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 MS4A4EQ96PG1 132 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 DGCR6LQ9BY27 220 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 PRDM9Q9NQV7 894 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 GIN1Q9NXP7 522 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 ZNF226Q9NYT6 803 aa19.92■□□□□ 0.78
SOX17-201ENST00000297316 GPR55Q9Y2T6 319 aaPredicted RBP19.92■□□□□ 0.78
SOX17-201ENST00000297316 ARRDC5A6NEK1 342 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 H3BMH7 237 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 FRS3O43559 492 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 MAN1A2O60476 641 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 TPST2O60704 377 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 INMTO95050 263 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 NSA2O95478 260 aaKnown RBP19.91■□□□□ 0.78
SOX17-201ENST00000297316 MAP2K4P45985 399 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 IDH2P48735 452 aaKnown RBP19.91■□□□□ 0.78
SOX17-201ENST00000297316 ARL4DP49703 201 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 CXCR4P61073 352 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 HSD11B2P80365 405 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 MGAT2Q10469 447 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 FAM53BQ14153 422 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 NR1D2Q14995 579 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 PRICKLE4Q2TBC4 344 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 PROX2Q3B8N5 592 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 DTWD2Q8NBA8 298 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 SLC7A13Q8TCU3 470 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 ZNF556Q9HAH1 456 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 MAT2BQ9NZL9 334 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 PCDHGA10Q9Y5H3 936 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 FER1L5A0AVI2 2057 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 ASCC3Q8N3C0 2202 aaKnown RBP19.91■□□□□ 0.78
SOX17-201ENST00000297316 FAM20BO75063 409 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 IGFBP1P08833 259 aaPredicted RBP19.91■□□□□ 0.78
SOX17-201ENST00000297316 RNH1P13489 461 aaKnown RBP19.91■□□□□ 0.78
SOX17-201ENST00000297316 MASP1P48740 699 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 GPLD1P80108 840 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 EMX1Q04741 257 aaPredicted RBP19.91■□□□□ 0.78
SOX17-201ENST00000297316 SLC13A2Q13183 592 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 LSRQ86X29 649 aaPredicted RBP19.91■□□□□ 0.78
SOX17-201ENST00000297316 OR4C6Q8NH72 309 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 ADAMTS15Q8TE58 950 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.91■□□□□ 0.78
SOX17-201ENST00000297316 MUL1Q969V5 352 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 DOK1Q99704 481 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 SMOC1Q9H4F8 434 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 MAN2C1Q9NTJ4 1040 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 FTSJ1Q9UET6 329 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 SNX5Q9Y5X3 404 aa19.91■□□□□ 0.78
SOX17-201ENST00000297316 OR2B3O76000 313 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 ACP2P11117 423 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 TTKP33981 857 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 DUSP5Q16690 384 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 TCTE1Q5JU00 501 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 DCST1Q5T197 706 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 HEPHL1Q6MZM0 1159 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 CDC73Q6P1J9 531 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 TTLL10Q6ZVT0 673 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 C16orf62Q7Z3J2 963 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 PARP8Q8N3A8 854 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 ZNF540Q8NDQ6 660 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 OR1L3Q8NH93 324 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 TRNT1Q96Q11 434 aaKnown RBP19.9■□□□□ 0.78
SOX17-201ENST00000297316 DHCR7Q9UBM7 475 aaKnown RBP19.9■□□□□ 0.78
SOX17-201ENST00000297316 MN1Q10571 1320 aaPredicted RBP19.9■□□□□ 0.78
SOX17-201ENST00000297316 HYAL3O43820 417 aaPredicted RBP19.9■□□□□ 0.78
SOX17-201ENST00000297316 MT-ND2P03891 347 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 GP2P55259 537 aaKnown RBP19.9■□□□□ 0.78
SOX17-201ENST00000297316 GNA13Q14344 377 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 PTGES3Q15185 160 aaKnown RBP19.9■□□□□ 0.78
SOX17-201ENST00000297316 FAM214AQ32MH5 1076 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 PRAMEF8Q5VWM4 474 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 MLIPQ5VWP3 458 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 PRAMEF7Q5VXH5 474 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 ZNF574Q6ZN55 896 aaPredicted RBP19.9■□□□□ 0.78
SOX17-201ENST00000297316 C11orf74Q86VG3 221 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 EID2Q8N6I1 236 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 FAR1Q8WVX9 515 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 SPATA5L1Q9BVQ7 753 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 PINK1Q9BXM7 581 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 CHRNA10Q9GZZ6 450 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 DNAAF2Q9NVR5 837 aaKnown RBP19.9■□□□□ 0.78
SOX17-201ENST00000297316 PTGFRNQ9P2B2 879 aa19.9■□□□□ 0.78
SOX17-201ENST00000297316 MKLN1Q9UL63 735 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms