RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 IL20RBQ6UXL0 311 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 HTR3DQ70Z44 454 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 CBLL1Q75N03 491 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 RABEPKQ7Z6M1 372 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 GJD3Q8N144 294 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 OR4K14Q8NGD5 310 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 OR51L1Q8NGJ5 315 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.37
HPS3-201ENST00000296051 HIST1H2AAQ96QV6 131 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 PLSCR3Q9NRY6 295 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 NUP50Q9UKX7 468 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 DDX60Q8IY21 1712 aaKnown RBP12.71□□□□□ -0.37
HPS3-201ENST00000296051 ANXA2P2A6NMY6 339 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 PSMD9O00233 223 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 FMO6PO60774 539 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 PRAMEF12O95522 483 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 ANXA2P07355 339 aaKnown RBP12.71□□□□□ -0.37
HPS3-201ENST00000296051 CCNOP22674 350 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 CD6P30203 668 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 HLA-FP30511 346 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 PIK3CBP42338 1070 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 NSDHLQ15738 373 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 LIPJQ5W064 366 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 FTMTQ8N4E7 242 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 CEP76Q8TAP6 659 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 NTN4Q9HB63 628 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 PISDQ9UG56 409 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 PCDHGA2Q9Y5H1 932 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 A0A1B0GVT2 93 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 FEZF1A0PJY2 475 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 BCAT2O15382 392 aaPredicted RBP12.71□□□□□ -0.37
HPS3-201ENST00000296051 GSTM3P21266 225 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 NKG7Q16617 165 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 WASH2PQ6VEQ5 465 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 RFLNAQ6ZTI6 216 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 RTN4RL1Q86UN2 441 aaPredicted RBP12.71□□□□□ -0.37
HPS3-201ENST00000296051 SDR16C5Q8N3Y7 309 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 EID2Q8N6I1 236 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 APOOQ9BUR5 198 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 CLEC2DQ9UHP7 191 aa12.71□□□□□ -0.37
HPS3-201ENST00000296051 TRIP11Q15643 1979 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 NPIPB15A6NHN6 443 aaPredicted RBP12.71□□□□□ -0.38
HPS3-201ENST00000296051 HMX3A6NHT5 357 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 CD9P21926 228 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 EDNRAP25101 427 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 CCR7P32248 378 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 TGM4P49221 684 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 PSMA6P60900 246 aaKnown RBP12.71□□□□□ -0.38
HPS3-201ENST00000296051 ST3GAL3Q11203 375 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 GARNL3Q5VVW2 1013 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 FAM205BPQ63HN1 556 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 SLC46A3Q7Z3Q1 461 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.71□□□□□ -0.38
HPS3-201ENST00000296051 OR4N5Q8IXE1 308 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 RLIMQ9NVW2 624 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 MED11Q9P086 117 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 CSNK1G3Q9Y6M4 447 aa12.71□□□□□ -0.38
HPS3-201ENST00000296051 TCRBV5S2A0A599 114 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SLC16A6O15403 523 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 GCGRP47871 477 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 DNASE1L1P49184 302 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 RAB28P51157 221 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SUOXP51687 545 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 AP3S2P59780 193 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 YBX1P67809 324 aaKnown RBP12.7□□□□□ -0.38
HPS3-201ENST00000296051 MLF2Q15773 248 aaPredicted RBP12.7□□□□□ -0.38
HPS3-201ENST00000296051 SLC5A12Q1EHB4 618 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 LPAR4Q99677 370 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SLC25A37Q9NYZ2 338 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 DKKL1Q9UK85 242 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SPAG17Q6Q759 2223 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 ZNF879B4DU55 563 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SCO2O43819 266 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 RBMXL2O75526 392 aaKnown RBP12.7□□□□□ -0.38
HPS3-201ENST00000296051 RNH1P13489 461 aaKnown RBP12.7□□□□□ -0.38
HPS3-201ENST00000296051 OSMP13725 252 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 NAA10P41227 235 aaPredicted RBP12.7□□□□□ -0.38
HPS3-201ENST00000296051 HBA1P69905 142 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 RBBP4Q09028 425 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 FADDQ13158 208 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SERPINA11Q86U17 422 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SLC30A8Q8IWU4 369 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 CNDP2Q96KP4 475 aaKnown RBP12.7□□□□□ -0.38
HPS3-201ENST00000296051 HYLS1Q96M11 299 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 ZNF385DQ9H6B1 395 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 CSNK1G1Q9HCP0 422 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 TAS2R10Q9NYW0 307 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 RP1P56715 2156 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 TEX13CA0A0J9YWL9 993 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 GRM7Q14831 915 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 GPR19Q15760 415 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 LRIT3Q3SXY7 679 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SBSNQ6UWP8 590 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 SHISA6Q6ZSJ9 500 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 GALNTL5Q7Z4T8 443 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 GDPD1Q8N9F7 314 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 OR7G1Q8NGA0 311 aa12.7□□□□□ -0.38
HPS3-201ENST00000296051 PEX11GQ96HA9 241 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms