RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 EXOC3L2Q2M3D2 409 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 KDM4DQ6B0I6 523 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 ISLR2Q6UXK2 745 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 COX15Q7KZN9 410 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 B3GNT8Q7Z7M8 397 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 VSTM2LQ96N03 204 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 PNO1Q9NRX1 252 aaKnown RBP21.25■□□□□ 0.99
PTX3-201ENST00000295927 SLC22A11Q9NSA0 550 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 FBXO34Q9NWN3 711 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 C3orf18Q9UK00 162 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 KCND3Q9UK17 655 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 ORC6Q9Y5N6 252 aa21.25■□□□□ 0.99
PTX3-201ENST00000295927 C17orf105B2RV13 164 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 MITFO75030 526 aaPredicted RBP21.24■□□□□ 0.99
PTX3-201ENST00000295927 STX11O75558 287 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 GADD45GO95257 159 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 AK1P00568 194 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 HMGA2P52926 109 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 RAD23AP54725 363 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 EPS8Q12929 822 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 ZNHIT3Q15649 155 aaPredicted RBP21.24■□□□□ 0.99
PTX3-201ENST00000295927 KRT80Q6KB66 452 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 FAHD1Q6P587 224 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 TMEM154Q6P9G4 183 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 PRSS58Q8IYP2 241 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 ATG16L2Q8NAA4 619 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 GIPC3Q8TF64 312 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 PTPMT1Q8WUK0 201 aaPredicted RBP21.24■□□□□ 0.99
PTX3-201ENST00000295927 OR10A5Q9H207 317 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 TRIM45Q9H8W5 580 aaPredicted RBP21.24■□□□□ 0.99
PTX3-201ENST00000295927 C11orf16Q9NQ32 467 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 FAM118AQ9NWS6 357 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 CTSFQ9UBX1 484 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 DTX4Q9Y2E6 619 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 CHST2Q9Y4C5 530 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 WDR87Q6ZQQ6 2873 aa21.24■□□□□ 0.99
PTX3-201ENST00000295927 GPR179Q6PRD1 2367 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 SYT5O00445 386 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 SOX30O94993 753 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 GP1BAP07359 652 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 PRKAR1BP31321 381 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 CSTF2P33240 577 aaKnown RBP eCLIP21.23■□□□□ 0.99
PTX3-201ENST00000295927 LIMS1P48059 325 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 TRA2AQ13595 282 aaKnown RBP eCLIP21.23■□□□□ 0.99
PTX3-201ENST00000295927 GPR68Q15743 365 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 RFX4Q33E94 735 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 LAIR1Q6GTX8 287 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 FIGNL1Q6PIW4 674 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 DHRS4L2Q6PKH6 230 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 USP51Q70EK9 711 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 GALNT5Q7Z7M9 940 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 ZNF619Q8N2I2 560 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 ZNF615Q8N8J6 731 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 OR6T1Q8NGN1 323 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 CLIP3Q96DZ5 547 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 SAP130Q9H0E3 1048 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 APMAPQ9HDC9 416 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 KIF17Q9P2E2 1029 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 IFT52Q9Y366 437 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 ZFP36L1Q07352 338 aaKnown RBP21.23■□□□□ 0.99
PTX3-201ENST00000295927 KCNAB2Q13303 367 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 MICAQ29983 383 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 LAPTM4BQ86VI4 370 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 PPP1R3BQ86XI6 285 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 PEX5LQ8IYB4 626 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 OFCC1Q8IZS5 231 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 SCOCQ9UIL1 159 aa21.23■□□□□ 0.99
PTX3-201ENST00000295927 ZNF443Q9Y2A4 671 aaPredicted RBP21.23■□□□□ 0.99
PTX3-201ENST00000295927 TCRBV16S1A1N1A0A5B0 115 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 EFCAB7A8K855 629 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 A8MUA0 341 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 PCDH17O14917 1159 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 CLPSP04118 112 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 PIGAP37287 484 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 SF3A2Q15428 464 aaKnown RBP21.22■□□□□ 0.99
PTX3-201ENST00000295927 COLEC12Q5KU26 742 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 TMEM151BQ8IW70 566 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 OR10G2Q8NGC3 310 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 C16orf52Q8NHV5 167 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 PHF10Q8WUB8 498 aaKnown RBP21.22■□□□□ 0.99
PTX3-201ENST00000295927 RMND5BQ96G75 393 aaPredicted RBP21.22■□□□□ 0.99
PTX3-201ENST00000295927 SENP5Q96HI0 755 aaPredicted RBP21.22■□□□□ 0.99
PTX3-201ENST00000295927 ARHGDIGQ99819 225 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 VN1R1Q9GZP7 353 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 NMNAT1Q9HAN9 279 aaPredicted RBP21.22■□□□□ 0.99
PTX3-201ENST00000295927 SLC13A4Q9UKG4 626 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 ACAD8Q9UKU7 415 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 MKL2Q9ULH7 1088 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 ZNF232Q9UNY5 417 aa21.22■□□□□ 0.99
PTX3-201ENST00000295927 GPR55Q9Y2T6 319 aaPredicted RBP21.22■□□□□ 0.99
PTX3-201ENST00000295927 AGAP5A6NIR3 686 aa21.21■□□□□ 0.99
PTX3-201ENST00000295927 KIAA0513O60268 411 aa21.21■□□□□ 0.99
PTX3-201ENST00000295927 KCNK2O95069 426 aa21.21■□□□□ 0.99
PTX3-201ENST00000295927 IL1RL1Q01638 556 aa21.21■□□□□ 0.99
PTX3-201ENST00000295927 FOXD4Q12950 439 aaPredicted RBP21.21■□□□□ 0.99
PTX3-201ENST00000295927 NKAIN1Q4KMZ8 207 aa21.21■□□□□ 0.99
PTX3-201ENST00000295927 TTC23Q5W5X9 447 aa21.21■□□□□ 0.99
PTX3-201ENST00000295927 CLIP4Q8N3C7 705 aa21.21■□□□□ 0.99
PTX3-201ENST00000295927 ZNF555Q8NEP9 628 aa21.21■□□□□ 0.99
PTX3-201ENST00000295927 TGIF2Q9GZN2 237 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms