RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TEX26Q8N6G2 289 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 AGAP4Q96P64 663 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 SDHAF3Q9NRP4 125 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 SACM1LQ9NTJ5 587 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 FBXL12Q9NXK8 326 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 CCDC163A0A0D9SF12 145 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 BLOC1S5-TXNDC5H3BN57 136 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 LCKP06239 509 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 FGF4P08620 206 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 C1GALT1C1LP0DN25 315 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC10A2Q12908 348 aaPredicted RBP11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 ABRAXAS2Q15018 415 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 KLBQ86Z14 1044 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 C7orf57Q8NEG2 295 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 SUN3Q8TAQ9 357 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 RBP7Q96R05 134 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 IL12RB2Q99665 862 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 GON7Q9BXV9 100 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 TPSD1Q9BZJ3 242 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 ACTL8Q9H568 366 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 UNKLQ9H9P5 680 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 NDUFAF4Q9P032 175 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 ACSL6Q9UKU0 697 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 CYP8B1Q9UNU6 501 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 H7C417 338 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 FMO6PO60774 539 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 NDUFV2P19404 249 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 NUDT1P36639 197 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 CXCR4P61073 352 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 SH3BP2P78314 561 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 CCINQ13939 588 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 GK3PQ14409 553 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 SPIN3Q5JUX0 258 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 AADACL4Q5VUY2 407 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 VTCN1Q7Z7D3 282 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 C12orf40Q86WS4 652 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 ADGRG5Q8IZF4 528 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 PTGDR2Q9Y5Y4 395 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 ENPP4Q9Y6X5 453 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 IGLV3-10A0A075B6K4 115 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 A0A1B0GVG6 124 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 HMX3A6NHT5 357 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 RHPN2P1A8MT19 583 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 C1orf196B1AJZ1 125 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 PRAF2O60831 178 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 RFPL3O75679 317 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 FCER2P06734 321 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 S100PP25815 95 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 NR4A2P43354 598 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 RAB8AP61006 207 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 FAM214AQ32MH5 1076 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 Q6ZS52 159 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 RAB11FIP2Q7L804 512 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 WDR53Q7Z5U6 358 aaPredicted RBP11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 TMPRSS12Q86WS5 348 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 APCDD1Q8J025 514 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 ZSCAN1Q8NBB4 408 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 HDHD5Q9BXW7 423 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 AGPAT4Q9NRZ5 378 aa11.21□□□□□ -0.61
SYNGAP1-201ENST00000293748 CXorf51AA0A1B0GTR3 108 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 UNC119BA6NIH7 251 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 MRPL3P09001 348 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 ACTBP60709 375 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 ACTG1P63261 375 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 CGB2Q6NT52 195 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC5A8Q8N695 610 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 IL17RCQ8NAC3 791 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR7G2Q8NG99 324 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR6N2Q8NGY6 317 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 CNOT9Q92600 299 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 HS6ST2Q96MM7 605 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 SEC61A2Q9H9S3 476 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 CARS2Q9HA77 564 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF638Q14966 1978 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 CD8B2A6NJW9 211 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 CD8BP10966 210 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 RAB3BP20337 219 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 SUOXP51687 545 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 MLLT10P55197 1068 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 SNTA1Q13424 505 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 CST6Q15828 149 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 BCL2L15Q5TBC7 163 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 Q6ZVU0 165 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 PIWIL3Q7Z3Z3 882 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 ISCA2Q86U28 154 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 DTWD1Q8N5C7 304 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 SORCS1Q8WY21 1168 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 RAB7BQ96AH8 199 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 TMEM125Q96AQ2 219 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 DHRS1Q96LJ7 313 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 PBDC1Q9BVG4 233 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 POLDIP3Q9BY77 421 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 MKRN2Q9H000 416 aaKnown RBP11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 SARDHQ9UL12 918 aa11.21□□□□□ -0.62
SYNGAP1-201ENST00000293748 TRBV2A0A0J9YWF9 115 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 TCRBV5S1A1TA0A578 114 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 TCRBV3S1A0A5B6 114 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 WASH3PC4AMC7 463 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 ARNTLO00327 626 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 MITFO75030 526 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms