RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 DICER1Q9UPY3 1922 aaKnown RBP14.96□□□□□ -0.01
SMAD6-201ENST00000288840 FFAR1O14842 300 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 PTTG1O95997 202 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 ZNF888P0CJ79 500 aaPredicted RBP14.96□□□□□ -0.02
SMAD6-201ENST00000288840 PSMA3P25788 255 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 WNT4P56705 351 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 SNAP47Q5SQN1 464 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 PRICKLE2Q7Z3G6 844 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 NKAIN4Q8IVV8 208 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 SAMD12Q8N8I0 201 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 COQ10AQ96MF6 247 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 RABL2AQ9UBK7 228 aaPredicted RBP14.96□□□□□ -0.02
SMAD6-201ENST00000288840 SERGEFQ9UGK8 458 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 CDV3Q9UKY7 258 aaKnown RBP14.96□□□□□ -0.02
SMAD6-201ENST00000288840 PTPRDP23468 1912 aa14.96□□□□□ -0.02
SMAD6-201ENST00000288840 HCN1O60741 890 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 SOX18P35713 384 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 BCL6P41182 706 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 CASP3P42574 277 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 STX4Q12846 297 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 TIGD4Q8IY51 512 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 LAS2Q8IYD9 372 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 OR56A1Q8NGH5 318 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 OR4D11Q8NGI4 311 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 OR7D2Q96RA2 312 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 SLC17A9Q9BYT1 436 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 SYNDIG1Q9H7V2 258 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 EXTL2Q9UBQ6 330 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 PCDHGB1Q9Y5G3 927 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 BPTFQ12830 3046 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 CARNS1A5YM72 827 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 OR6C74A6NCV1 312 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 ZAR1LA6NP61 321 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 C12orf71A8MTZ7 269 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 A8MUA0 341 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 PRR23D1E9PI22 279 aaPredicted RBP14.95□□□□□ -0.02
SMAD6-201ENST00000288840 EMC8O43402 210 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 AKAP8O43823 692 aaKnown RBP14.95□□□□□ -0.02
SMAD6-201ENST00000288840 B3GALT2O43825 422 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 PRR23D2P0DMB1 279 aaPredicted RBP14.95□□□□□ -0.02
SMAD6-201ENST00000288840 GSTM3P21266 225 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 PYCR1P32322 319 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 TAF8Q7Z7C8 310 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 AMIGO1Q86WK6 493 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 ZFPM2Q8WW38 1151 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 METTL2AQ96IZ6 378 aaKnown RBP14.95□□□□□ -0.02
SMAD6-201ENST00000288840 OPALINQ96PE5 141 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 THSD1Q9NS62 852 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 TXNL4BQ9NX01 149 aaKnown RBP14.95□□□□□ -0.02
SMAD6-201ENST00000288840 GPR34Q9UPC5 381 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 FAM171A2A8MVW0 826 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 NPC1O15118 1278 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 KCNK2O95069 426 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 GABRA3P34903 492 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 HSD17B2P37059 387 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 EXOSC7Q15024 291 aaKnown RBP14.95□□□□□ -0.02
SMAD6-201ENST00000288840 CNIH2Q6PI25 160 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 GLCCI1Q86VQ1 547 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 RANBP3LQ86VV4 465 aaPredicted RBP14.95□□□□□ -0.02
SMAD6-201ENST00000288840 HMGB4Q8WW32 186 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 CD180Q99467 661 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 PLA2G12AQ9BZM1 189 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 OR52A5Q9H2C5 316 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 TMEM27Q9HBJ8 222 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 MRPL15Q9P015 296 aaKnown RBP14.95□□□□□ -0.02
SMAD6-201ENST00000288840 UGT2A1Q9Y4X1 527 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 C5orf42Q9H799 3197 aa14.95□□□□□ -0.02
SMAD6-201ENST00000288840 A0A1W2PR48 441 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 RPP14O95059 124 aaKnown RBP14.94□□□□□ -0.02
SMAD6-201ENST00000288840 CHRM4P08173 479 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 HOXB2P14652 356 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 BSGP35613 385 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 ILKQ13418 452 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 BAK1Q16611 211 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 TTLQ8NG68 377 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 OR52I1Q8NGK6 324 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 SNX33Q8WV41 574 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 SPRYD4Q8WW59 207 aaPredicted RBP14.94□□□□□ -0.02
SMAD6-201ENST00000288840 ANKHQ9HCJ1 492 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 A0A087WUU8 490 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 A0A1B0GVT2 93 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 SOCS6O14544 535 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 PIP5K1CO60331 668 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 RNGTTO60942 597 aaKnown RBP14.94□□□□□ -0.02
SMAD6-201ENST00000288840 GJA4P35212 333 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 SYT14P1Q58G82 188 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 FAM111BQ6SJ93 734 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 FBXL6Q8N531 539 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 OR4K14Q8NGD5 310 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 SOHLH2Q9NX45 425 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 STMN3Q9NZ72 180 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 LOC102723532A0A0G2JNH3 316 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 RIIAD1A6NNX1 92 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 HLA-DPB1P04440 258 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 LRIT3Q3SXY7 679 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 ENTPD8Q5MY95 495 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 NXNL2Q5VZ03 156 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 PHC2Q8IXK0 858 aa14.94□□□□□ -0.02
SMAD6-201ENST00000288840 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
SMAD6-201ENST00000288840 CCL4L1Q8NHW4 92 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms