RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ASB12Q8WXK4 309 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 DIRAS2Q96HU8 199 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 SLC6A18Q96N87 628 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 FYTTD1Q96QD9 318 aaKnown RBP17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 CXorf36Q9H7Y0 433 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 ACOXLQ9NUZ1 547 aa17.2■□□□□ 0.34
PDLIM3-201ENST00000284767 A0A1W2PQL4 384 aaPredicted RBP17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 LRIT2A6NDA9 550 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 WWP2O00308 870 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 BTN3A3O00478 584 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 TMCC2O75069 709 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 IGHV4-34P06331 123 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 DDCP20711 480 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 FEN1P39748 380 aaKnown RBP17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 GSTM5P46439 218 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 TGM4P49221 684 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 SRP54P61011 504 aaKnown RBP17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 HNRNPA0Q13151 305 aaKnown RBP17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 HEPACAMQ14CZ8 416 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 TCTE3Q8IZS6 198 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 MED18Q9BUE0 208 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 RPRD1BQ9NQG5 326 aaKnown RBP17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 PLEKHB1Q9UF11 243 aaPredicted RBP17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 DIMT1Q9UNQ2 313 aaKnown RBP17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 COL6A3P12111 3177 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 CELA2BP08218 269 aaPredicted RBP17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 CPEP16870 476 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 SLC9A3P48764 834 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 DGKEP52429 567 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 MXD1Q05195 221 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 QPRTQ15274 297 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 DCST1Q5T197 706 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 AMIGO1Q86WK6 493 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 NUDT13Q86X67 352 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 NRROSQ86YC3 692 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 PEX5LQ8IYB4 626 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 RGMAQ96B86 450 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 DHRS1Q96LJ7 313 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 NELL2Q99435 816 aa17.19■□□□□ 0.34
PDLIM3-201ENST00000284767 H3BN98 237 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 KCNJ13O60928 360 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 TRIM3O75382 744 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 SOX14O95416 240 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 CHRM5P08912 532 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 UQCRC2P22695 453 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 ELAVL4P26378 380 aaKnown RBP17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 ERP29P30040 261 aaKnown RBP17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 SSR2P43308 183 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 FOXD4Q12950 439 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 HSPB3Q12988 150 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 TIGD3Q6B0B8 471 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 AP3S1Q92572 193 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 TOE1Q96GM8 510 aaKnown RBP17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 RAB11FIP5Q9BXF6 653 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 KLF15Q9UIH9 416 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 KLHL21Q9UJP4 597 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 SCN3AQ9NY46 2000 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 TDRD6O60522 2096 aaKnown RBP17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 PLD2O14939 933 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 POLR1CO15160 346 aaPredicted RBP17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 OR10H3O60404 316 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 TSPAN19P0C672 248 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 MSL3P1P0C860 447 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 CPN2P22792 545 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 SEC23BQ15437 767 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 Q5BKY6 102 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 SAXO2Q658L1 398 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 OR4C11Q6IEV9 310 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 IKBIPQ70UQ0 350 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 OR8K5Q8NH50 307 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 ENKURQ8TC29 256 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 NLNQ9BYT8 704 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 COLEC10Q9Y6Z7 277 aa17.18■□□□□ 0.34
PDLIM3-201ENST00000284767 A0A0B4J293 547 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 ERI3O43414 337 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 RAB36O95755 333 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 HOXC4P09017 264 aaPredicted RBP17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 DDX5P17844 614 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 RAB8AP61006 207 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 CCDC58Q4VC31 144 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 SLC25A30Q5SVS4 291 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 TCEANCQ8N8B7 351 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 ZFAND1Q8TCF1 268 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 RNF31Q96EP0 1072 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 KCTD7Q96MP8 289 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 TPSD1Q9BZJ3 242 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 POLR2J3Q9H1A7 115 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 KIR3DX1Q9H7L2 352 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 NT5DC2Q9H857 520 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 CA14Q9ULX7 337 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 C5orf58C9J3I9 102 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 CLEC3AO75596 197 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 PDE9AO76083 593 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 APBB3O95704 486 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 H1F0P07305 194 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 AKT2P31751 481 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 KIR2DL3P43628 341 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 CD83Q01151 205 aa17.17■□□□□ 0.34
PDLIM3-201ENST00000284767 ALDH6A1Q02252 535 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms