RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 IMPG1Q17R60 797 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 CT45A2Q5DJT8 189 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 SH2D4BQ5SQS7 431 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 CHMP1BQ7LBR1 199 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 SLC22A9Q8IVM8 553 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 CTAGE4Q8IX94 777 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 UBQLNLQ8IYU4 475 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 TMEM151AQ8N4L1 468 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 GBP7Q8N8V2 638 aaPredicted RBP11.58□□□□□ -0.56
CD44-203ENST00000278386 C16orf78Q8WTQ4 265 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 WNT2BQ93097 391 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 ERP27Q96DN0 273 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 MBD6Q96DN6 1003 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 APIPQ96GX9 242 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 POM121Q96HA1 1249 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 VSTM2LQ96N03 204 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 KCNA7Q96RP8 456 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 SLC35C2Q9NQQ7 365 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 TAS2R9Q9NYW1 312 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 PPP4R1LQ9P1A2 415 aa11.58□□□□□ -0.56
CD44-203ENST00000278386 PCNX3Q9H6A9 2034 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 SH3D21A4FU49 640 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 GOLGA8RI6L899 631 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 TSPAN2O60636 221 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 SMNDC1O75940 238 aaKnown RBP eCLIP11.57□□□□□ -0.56
CD44-203ENST00000278386 GOSR1O95249 250 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 ENO1P06733 434 aaKnown RBP11.57□□□□□ -0.56
CD44-203ENST00000278386 ABHD2P08910 425 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 ANXA4P09525 319 aaPredicted RBP11.57□□□□□ -0.56
CD44-203ENST00000278386 DPP4P27487 766 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 EVI2BP34910 448 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 PKNOX1P55347 436 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 PSPHP78330 225 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 ZNF763Q0D2J5 394 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 STX5Q13190 355 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 DEFB113Q30KQ7 82 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 SPDYAQ5MJ70 313 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 RAET1LQ5VY80 246 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 OR7G2Q8NG99 324 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 G6PC3Q9BUM1 346 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 PIGMQ9H3S5 423 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 MIEF1Q9NQG6 463 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 PACSIN3Q9UKS6 424 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 TIMM22Q9Y584 194 aa11.57□□□□□ -0.56
CD44-203ENST00000278386 NF1P21359 2839 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 ACANP16112 2415 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 C17orf51A8MQB3 221 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 CRCPO75575 148 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 HRGP04196 525 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 JUNP05412 331 aaKnown RBP11.56□□□□□ -0.56
CD44-203ENST00000278386 ZNF708P17019 499 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 IMPDH1P20839 514 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 FLNAP21333 2647 aaKnown RBP11.56□□□□□ -0.56
CD44-203ENST00000278386 CHMP24386 653 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 GCAP28676 217 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 NTSP30990 170 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 MPIP34949 423 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 MC3RP41968 323 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 GSTM5P46439 218 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 NCBP2P52298 156 aaKnown RBP eCLIP11.56□□□□□ -0.56
CD44-203ENST00000278386 PNLIPRP2P54317 469 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 CLDN18P56856 261 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 GAB1Q13480 694 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 GLE1Q53GS7 698 aaKnown RBP11.56□□□□□ -0.56
CD44-203ENST00000278386 TMEM107Q6UX40 140 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 TIFABQ6ZNK6 161 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 ADGRE4PQ86SQ3 457 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 LCA5Q86VQ0 697 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 MEIOBQ8N635 442 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 CCNYL1Q8N7R7 359 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 CNEP1R1Q8N9A8 125 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 OR4N2Q8NGD1 307 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 DACH2Q96NX9 599 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 UCN2Q96RP3 112 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 SHCBP1LQ9BZQ2 653 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 STMN4Q9H169 189 aaPredicted RBP11.56□□□□□ -0.56
CD44-203ENST00000278386 MID1IP1Q9NPA3 183 aa11.56□□□□□ -0.56
CD44-203ENST00000278386 EIF3LQ9Y262 564 aaKnown RBP11.56□□□□□ -0.56
CD44-203ENST00000278386 POLR3HQ9Y535 204 aaPredicted RBP11.56□□□□□ -0.56
CD44-203ENST00000278386 A0A1W2PNV4 684 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 SLC22A20A6NK97 555 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 CASKO14936 926 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 SEC14L5O43304 696 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 RIPK2O43353 540 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 HCRTR2O43614 444 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 PLOD3O60568 738 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 TGM6O95932 706 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 HK1P19367 917 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 DDCP20711 480 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 RFX3P48380 749 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 PRKAA2P54646 552 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 DSCR4P56555 118 aaPredicted RBP11.55□□□□□ -0.56
CD44-203ENST00000278386 SIRPAP78324 504 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 ADAM8P78325 824 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 C2orf80Q0P641 193 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 KRTAP21-3Q3LHN1 58 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 SMPDL3BQ92485 455 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 L3HYPDHQ96EM0 354 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 FAM111AQ96PZ2 611 aa11.55□□□□□ -0.56
CD44-203ENST00000278386 DSN1Q9H410 356 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms