RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 PITPNBP48739 271 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 SLC11A2P49281 568 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 TAS2R50P59544 299 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 MTAPQ13126 283 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 PODNL1Q6PEZ8 512 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 OR4D9Q8NGE8 314 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 RPLP0P6Q8NHW5 317 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 CNOT9Q92600 299 aaKnown RBP12.09□□□□□ -0.47
HERC6-202ENST00000273960 PPCDCQ96CD2 204 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 ARSGQ96EG1 525 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 LRRC46Q96FV0 321 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 UROC1Q96N76 676 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 DMRTA2Q96SC8 542 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 KCNJ15Q99712 375 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 MED20Q9H944 212 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 FBXW2Q9UKT8 454 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 FKBP7Q9Y680 259 aa12.09□□□□□ -0.47
HERC6-202ENST00000273960 C1orf226A1L170 272 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 OR6C75A6NL08 312 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 ARHGEF33A8MVX0 844 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 WASH4PA8MWX3 477 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 TO15178 435 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 LGI1O95970 557 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 WNT1P04628 370 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 CKMP06732 381 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 SRPRAP08240 638 aaKnown RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 LIMS3P0CW19 117 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 LIMS4P0CW20 117 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 F8A1P23610 371 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 ACSL1P33121 698 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 CAPZA2P47755 286 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 GIPRP48546 466 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 GPRC6AQ5T6X5 926 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 PGBD2Q6P3X8 592 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 LILRA3Q8N6C8 439 aaPredicted RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 WDR48Q8TAF3 677 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 TRMT10AQ8TBZ6 339 aaKnown RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 ING5Q8WYH8 240 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 SCMH1Q96GD3 660 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 DPH7Q9BTV6 452 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 ZNF436Q9C0F3 470 aaPredicted RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 SHARPINQ9H0F6 387 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 QRSL1Q9H0R6 528 aaKnown RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 CA10Q9NS85 328 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 SEC14L3Q9UDX4 400 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 ANGPT4Q9Y264 503 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 RUVBL1Q9Y265 456 aaKnown RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 OR10H1Q9Y4A9 318 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 MTMR11A4FU01 709 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 ZNF593O00488 134 aaPredicted RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 ARPC1BO15143 372 aaKnown RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 MAGEB4O15481 346 aaPredicted RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 KLK1P06870 262 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 RAB3BP20337 219 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 ATP5C1P36542 298 aaKnown RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 BUD31P41223 144 aaPredicted RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 CDH11P55287 796 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 STXBP1P61764 594 aaKnown RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 ARHGAP15Q53QZ3 475 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 FAM209BQ5JX69 171 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 TCTN3Q6NUS6 607 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 CD300LGQ6UXG3 332 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 RPTNQ6XPR3 784 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 FAM9CQ8IZT9 166 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 MEIOBQ8N635 442 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 OR4K5Q8NGD3 323 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 OR52B4Q8NGK2 314 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 KLK6Q92876 244 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 KIAA1143Q96AT1 154 aaPredicted RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 ZNF578Q96N58 590 aaPredicted RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 FNDC11Q9BVV2 318 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 TEX10Q9NXF1 929 aaPredicted RBP12.08□□□□□ -0.48
HERC6-202ENST00000273960 ACSL5Q9ULC5 683 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 TET1Q8NFU7 2136 aa12.08□□□□□ -0.48
HERC6-202ENST00000273960 CPSF4LA6NMK7 179 aaKnown RBP12.07□□□□□ -0.48
HERC6-202ENST00000273960 M0QZQ0 153 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 RTCAO00442 366 aaKnown RBP12.07□□□□□ -0.48
HERC6-202ENST00000273960 STATHP02808 62 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 HLA-DPB1P04440 258 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 JUPP14923 745 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 MMP11P24347 488 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 GABRA5P31644 462 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 YBEYP58557 167 aaPredicted RBP12.07□□□□□ -0.48
HERC6-202ENST00000273960 MPEG1Q2M385 716 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.07□□□□□ -0.48
HERC6-202ENST00000273960 FBXO22Q8NEZ5 403 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 PDFQ9HBH1 243 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 MIEF1Q9NQG6 463 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 ZNF282Q9UDV7 671 aaPredicted RBP12.07□□□□□ -0.48
HERC6-202ENST00000273960 PLCL2Q9UPR0 1127 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 SF3B6Q9Y3B4 125 aaKnown RBP12.07□□□□□ -0.48
HERC6-202ENST00000273960 SEC14L5O43304 696 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 SLC28A2O43868 658 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 IGF2P01344 180 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 SLC6A11P48066 632 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 PREPP48147 710 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 TM4SF4P48230 202 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 OR8J2Q8NGG1 315 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 NANPQ8TBE9 248 aa12.07□□□□□ -0.48
HERC6-202ENST00000273960 ZNF296Q8WUU4 475 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms