RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ZNF311Q5JNZ3 666 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 PHF19Q5T6S3 580 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 PWWP2BQ6NUJ5 590 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 VRK2Q86Y07 508 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 RBM45Q8IUH3 476 aaKnown RBP15.22■□□□□ 0.03
TPM1-201ENST00000267996 ZNF619Q8N2I2 560 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 OR7G1Q8NGA0 311 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 OR52P1PQ8NH57 321 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 GPR151Q8TDV0 419 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 PTPMT1Q8WUK0 201 aaPredicted RBP15.22■□□□□ 0.03
TPM1-201ENST00000267996 PIK3R3Q92569 461 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 TSLPQ969D9 159 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 PSD2Q9BQI7 771 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 C3orf18Q9UK00 162 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 MKLN1Q9UL63 735 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 ERVK-19Q9WJR5 959 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 SLC9A8Q9Y2E8 581 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 IFT52Q9Y366 437 aa15.22■□□□□ 0.03
TPM1-201ENST00000267996 DMDP11532 3685 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 GXYLT2A0PJZ3 443 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 AGAP5A6NIR3 686 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 KIAA0513O60268 411 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 SCRG1O75711 98 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 THBS1P07996 1170 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 HBQ1P09105 142 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 RAD23AP54725 363 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 CDH12P55289 794 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 MYBPC1Q00872 1141 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 ZIK1Q3SY52 487 aaPredicted RBP15.21■□□□□ 0.03
TPM1-201ENST00000267996 CCNJQ5T5M9 372 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 ZNF385CQ66K41 422 aaPredicted RBP15.21■□□□□ 0.03
TPM1-201ENST00000267996 B3GNT8Q7Z7M8 397 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 HMGN2P46Q86SG4 172 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 BMPERQ8N8U9 685 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 PLPP5Q8NEB5 264 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 VANGL1Q8TAA9 524 aaPredicted RBP15.21■□□□□ 0.03
TPM1-201ENST00000267996 RHBDD1Q8TEB9 315 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 GIPC3Q8TF64 312 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 FBXL20Q96IG2 436 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 CNPPD1Q9BV87 410 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 OR10A5Q9H207 317 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 SOX17Q9H6I2 414 aaPredicted RBP15.21■□□□□ 0.03
TPM1-201ENST00000267996 TRIM45Q9H8W5 580 aaPredicted RBP15.21■□□□□ 0.03
TPM1-201ENST00000267996 FAM118AQ9NWS6 357 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 OCIAD1Q9NX40 245 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 PCDHGA8Q9Y5G5 932 aa15.21■□□□□ 0.03
TPM1-201ENST00000267996 FRYLO94915 3013 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 C17orf105B2RV13 164 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 M0R3H8 397 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 CDX4O14627 284 aaPredicted RBP15.2■□□□□ 0.02
TPM1-201ENST00000267996 BRINP1O60477 761 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 GADD45GO95257 159 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 ZNF806P0C7X5 589 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 FUT4P22083 530 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 IGFBP5P24593 272 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 CSTF2P33240 577 aaKnown RBP eCLIP15.2■□□□□ 0.02
TPM1-201ENST00000267996 TRHRP34981 398 aaPredicted RBP15.2■□□□□ 0.02
TPM1-201ENST00000267996 KCNAB2Q13303 367 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 IL11RAQ14626 422 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 ZNHIT3Q15649 155 aaPredicted RBP15.2■□□□□ 0.02
TPM1-201ENST00000267996 MICAQ29983 383 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 EXOC3L2Q2M3D2 409 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 MINDY4Q4G0A6 757 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 NKAIN1Q4KMZ8 207 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 TTC23Q5W5X9 447 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 PPP1R3BQ86XI6 285 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 PEX5LQ8IYB4 626 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 PIK3C3Q8NEB9 887 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 OR6T1Q8NGN1 323 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 C16orf52Q8NHV5 167 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 FKBP10Q96AY3 582 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 SLC7A5P2Q9GIP4 190 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 VN1R1Q9GZP7 353 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 NMNAT1Q9HAN9 279 aaPredicted RBP15.2■□□□□ 0.02
TPM1-201ENST00000267996 FBXO34Q9NWN3 711 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 CTSFQ9UBX1 484 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 FTSJ1Q9UET6 329 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 A4GNTQ9UNA3 340 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 ZNF443Q9Y2A4 671 aaPredicted RBP15.2■□□□□ 0.02
TPM1-201ENST00000267996 DTX4Q9Y2E6 619 aa15.2■□□□□ 0.02
TPM1-201ENST00000267996 SYNDIG1LA6NDD5 238 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 ARRDC5A6NEK1 342 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 E9PQ18 207 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 SLC16A6O15403 523 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 KCNK2O95069 426 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 IGKV3-11P04433 115 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 ITGAMP11215 1152 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 CD59P13987 128 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 TNNI3P19429 210 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 PGDP52209 483 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 EEF1A1P68104 462 aaKnown RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 ELAVL1Q15717 326 aaKnown RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 NPTX1Q15818 432 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 COLEC12Q5KU26 742 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 NPSR1Q6W5P4 371 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 TMEM151BQ8IW70 566 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 AGBL5Q8NDL9 886 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 OR10G2Q8NGC3 310 aa15.19■□□□□ 0.02
TPM1-201ENST00000267996 PHF10Q8WUB8 498 aaKnown RBP15.19■□□□□ 0.02
TPM1-201ENST00000267996 ATOH1Q92858 354 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms