RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ATXN7L1Q9ULK2 861 aaPredicted RBP8.27□□□□□ -1.09
VAPB-201ENST00000265619 EYSQ5T1H1 3165 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 TUBAL3A6NHL2 446 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ARPC5O15511 151 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SCN2BO60939 215 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ICOSLGO75144 302 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SPDEFO95238 335 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 PDYNP01213 254 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ANXA8P13928 327 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 GPX2P18283 190 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 GPX4P36969 197 aaPredicted RBP8.26□□□□□ -1.09
VAPB-201ENST00000265619 KCNJ5P48544 419 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 GAS1P54826 345 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 GAB1Q13480 694 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 C2orf68Q2NKX9 166 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ZNF660Q6AZW8 331 aaPredicted RBP8.26□□□□□ -1.09
VAPB-201ENST00000265619 SFRP4Q6FHJ7 346 aaPredicted RBP8.26□□□□□ -1.09
VAPB-201ENST00000265619 ELP2Q6IA86 826 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SBSNQ6UWP8 590 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 RAB11FIP2Q7L804 512 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 PRSS45Q7RTY3 260 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 LAPTM4BQ86VI4 370 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 MARCH9Q86YJ5 346 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 LNX2Q8N448 690 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 OR5T2Q8NGG2 359 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 CHTF18Q8WVB6 975 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 MS4A4EQ96PG1 132 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ACBD6Q9BR61 282 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 DOHHQ9BU89 302 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SLC25A51Q9H1U9 297 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 CHST8Q9H2A9 424 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 A0A0G2JPF8 293 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.26□□□□□ -1.09
VAPB-201ENST00000265619 MEX3AA1L020 520 aaKnown RBP8.26□□□□□ -1.09
VAPB-201ENST00000265619 HNRNPCL3B7ZW38 293 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 RGS14O43566 566 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SH3BGRLO75368 114 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 HNRNPCL4P0DMR1 293 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 RFC3P40938 356 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 NCF4Q15080 339 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ATP13A5Q4VNC0 1218 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SLC39A5Q6ZMH5 540 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 MRPL10Q7Z7H8 261 aaKnown RBP8.26□□□□□ -1.09
VAPB-201ENST00000265619 TRIM69Q86WT6 500 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SCARB1Q8WTV0 552 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 GLYATL2Q8WU03 294 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 AP3S1Q92572 193 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 CDKN2AIPNLQ96HQ2 116 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SUSD3Q96L08 255 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 C10orf90Q96M02 699 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SPON2Q9BUD6 331 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 DPAGT1Q9H3H5 408 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 GPATCH2Q9NW75 528 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SPHK1Q9NYA1 384 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 PTTG3PQ9NZH4 202 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 GHRLQ9UBU3 117 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 FZD4Q9ULV1 537 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 MRPS23Q9Y3D9 190 aaKnown RBP8.26□□□□□ -1.09
VAPB-201ENST00000265619 PLEKHM1Q9Y4G2 1056 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 PCDHGC4Q9Y5F7 938 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 PCDHGA5Q9Y5G8 931 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 PCDHGA1Q9Y5H4 931 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 DOCK6Q96HP0 2047 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SDK1Q7Z5N4 2213 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 KNL1Q8NG31 2342 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 A0A1B0GVI7 797 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 A0A1W2PPE3 182 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SULT1C2O00338 296 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 MANBAO00462 879 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 FFAR1O14842 300 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 TLX2O43763 284 aaPredicted RBP8.26□□□□□ -1.09
VAPB-201ENST00000265619 FZD7O75084 574 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ULK1O75385 1050 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 HTR3BO95264 441 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 BPNT1O95861 308 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 HLA-FP30511 346 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 MAPKAPK2P49137 400 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 HTR4Q13639 388 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 MRNIPQ6NTE8 343 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 CDPF1Q6NVV7 123 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 USP53Q70EK8 1073 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 LIMS2Q7Z4I7 341 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 LHFPL3Q86UP9 236 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 C12orf40Q86WS4 652 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SERPINA12Q8IW75 414 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 OR14A16Q8NHC5 309 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 NEIL3Q8TAT5 605 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ARRDC2Q8TBH0 407 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 RXFP4Q8TDU9 374 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 OR1F2PQ96R84 312 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 WFDC6Q9BQY6 131 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ZNF251Q9BRH9 671 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 ORAI3Q9BRQ5 295 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 QRSL1Q9H0R6 528 aaKnown RBP8.26□□□□□ -1.09
VAPB-201ENST00000265619 POPDC3Q9HBV1 291 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 BPIFA1Q9NP55 256 aa8.26□□□□□ -1.09
VAPB-201ENST00000265619 SZT2Q5T011 3432 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 MTMR11A4FU01 709 aa8.25□□□□□ -1.09
VAPB-201ENST00000265619 RPP40O75818 363 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms