RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 KRBOX1C9JBD0 128 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 M0R3H8 397 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 TOR1AO14656 332 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 HRO43593 1189 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 TSPAN6O43657 245 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 PRAF2O60831 178 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 EIF4EP06730 217 aaKnown RBP11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 ACP5P13686 325 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 HOXD10P28358 340 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 CD79BP40259 229 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 STAT5AP42229 794 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 EPHA5P54756 1037 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 TSTA3Q13630 321 aaPredicted RBP11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 MPP7Q5T2T1 576 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 IER5LQ5T953 404 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 SLC8B1Q6J4K2 584 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 LYPD4Q6UWN0 246 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 SLC9B2Q86UD5 537 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 KLBQ86Z14 1044 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 SLITRK4Q8IW52 837 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 KRT78Q8N1N4 520 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 TRAM1L1Q8N609 369 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 OR4F15Q8NGB8 312 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 SETD7Q8WTS6 366 aaKnown RBP11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 ZNF480Q8WV37 535 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 TRMT2BQ96GJ1 504 aaKnown RBP11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 TOE1Q96GM8 510 aaKnown RBP11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 GPA33Q99795 319 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 PLA2G12AQ9BZM1 189 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 ZNF436Q9C0F3 470 aaPredicted RBP11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 SMG9Q9H0W8 520 aaKnown RBP11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 CD93Q9NPY3 652 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 BABAM2Q9NXR7 383 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 LSM7Q9UK45 103 aaKnown RBP11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 RWDD3Q9Y3V2 267 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 VWA8A3KMH1 1905 aa11.65□□□□□ -0.55
CHMP2B-201ENST00000263780 LOC105369274A0A096LPK9 316 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 FZD7O75084 574 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 UBL3O95164 117 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 GIFP27352 417 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 BMP8BP34820 402 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 NUP62P37198 522 aaPredicted RBP11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 SLC11A1P49279 550 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 MMP15P51511 669 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 LMAN2Q12907 356 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 DYRK1AQ13627 763 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 TRAM2Q15035 370 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 ZNF791Q3KP31 576 aaPredicted RBP11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 SLC36A2Q495M3 483 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 SMARCD3Q6STE5 483 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 BMP8AQ7Z5Y6 402 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 OR4N4Q8N0Y3 316 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 OR2T4Q8NH00 348 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 PIGXQ8TBF5 258 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 PTPN18Q99952 460 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 RBCK1Q9BYM8 510 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 ANKRD19PQ9H560 264 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 BCL2L10Q9HD36 194 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 KLF15Q9UIH9 416 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 RASD1Q9Y272 281 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 PLXNB3Q9ULL4 1909 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 C1orf105O95561 183 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 WDPCPO95876 746 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 SSTR2P30874 369 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 PREPP48147 710 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 MAP4K2Q12851 820 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 MPPE1Q53F39 396 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 KIAA1161Q6NSJ0 714 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 SFXN4Q6P4A7 337 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 TMEM81Q6P7N7 255 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 PRSS55Q6UWB4 352 aaPredicted RBP11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 WASH2PQ6VEQ5 465 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 Q6ZNB5 142 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 OR2T35Q8NGX2 323 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 FIBINQ8TAL6 211 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 GIMAP1Q8WWP7 306 aa11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 ZNF764Q96H86 408 aaPredicted RBP11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 ACSS1Q9NUB1 689 aaPredicted RBP11.64□□□□□ -0.55
CHMP2B-201ENST00000263780 TMEM202A6NGA9 273 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 SURF4O15260 269 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 BNIP3LO60238 219 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 TFPIP10646 304 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 VIPR1P32241 457 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 PRLHRP49683 370 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 TAS2R41P59536 307 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 HSPB3Q12988 150 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 PLD1Q13393 1074 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 C22orf39Q6P5X5 142 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 GID4Q8IVV7 300 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 FTMTQ8N4E7 242 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 ACBD7Q8N6N7 88 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 OR6T1Q8NGN1 323 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 TRMT10AQ8TBZ6 339 aaKnown RBP11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 XAGE5Q8WWM1 108 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 MRPS31Q92665 395 aaKnown RBP11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 SLC35G5Q96KT7 338 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 ABHD1Q96SE0 405 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 ZNF649Q9BS31 505 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 PINK1Q9BXM7 581 aa11.63□□□□□ -0.55
CHMP2B-201ENST00000263780 RSPO3Q9BXY4 272 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms