RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 HYAL2Q12891 473 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 NRMQ8IXM6 262 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 RAB42Q8N4Z0 105 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 BBS1Q8NFJ9 593 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 AMDHD1Q96NU7 426 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 UCKL1Q9NWZ5 548 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 KLF15Q9UIH9 416 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 HSPB11Q9Y547 144 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 TRPM6Q9BX84 2022 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 PRODHO43272 600 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 LALBAP00709 142 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 MRPL3P09001 348 aaKnown RBP11.89□□□□□ -0.51
LIG1-201ENST00000263274 MAT2AP31153 395 aaKnown RBP11.89□□□□□ -0.51
LIG1-201ENST00000263274 AHRP35869 848 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 IFNGR2P38484 337 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 KHKP50053 298 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 PLK5Q496M5 336 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 NKAIN4Q8IVV8 208 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 NRSN1Q8IZ57 195 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 OR5H6Q8NGV6 325 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 ADAMTS15Q8TE58 950 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 COQ10AQ96MF6 247 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 SNX18Q96RF0 628 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 DDX31Q9H8H2 851 aaKnown RBP11.89□□□□□ -0.51
LIG1-201ENST00000263274 ATG4BQ9Y4P1 393 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 PLXNB3Q9ULL4 1909 aa11.89□□□□□ -0.51
LIG1-201ENST00000263274 TRAV6A0A075B6T7 132 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 CCDC85CA6NKD9 419 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 E9PQ18 207 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 HYAL3O43820 417 aaPredicted RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 RPN2P04844 631 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 ALPPP05187 535 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 CEBPBP17676 345 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 ACADLP28330 430 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 CTNNB1P35222 781 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 TAS2R38P59533 333 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 GPR68Q15743 365 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 FCRLBQ6BAA4 426 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 ARL9Q6T311 187 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 TIGD4Q8IY51 512 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 FAM26EQ8N5C1 309 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 OR9A2Q8NGT5 310 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 PIGXQ8TBF5 258 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 SPRYD4Q8WW59 207 aaPredicted RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 DCLRE1CQ96SD1 692 aaKnown RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 OR52A5Q9H2C5 316 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 CXXC1Q9P0U4 656 aaPredicted RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 PLEKHM1Q9Y4G2 1056 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 MAU2Q9Y6X3 613 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 HELZP42694 1942 aaKnown RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 DVL2O14641 736 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 REM1O75628 298 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 TBX6O95947 436 aaPredicted RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 CPN2P22792 545 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 CERS1P27544 350 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 STXBP1P61764 594 aaKnown RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 COX10Q12887 443 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 LTB4RQ15722 352 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 OCLNQ16625 522 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 BTBD16Q32M84 506 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 KIF18BQ86Y91 864 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 CPOQ8IVL8 374 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 LRRC56Q8IYG6 542 aaPredicted RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 GDPD1Q8N9F7 314 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 TP53I13Q8NBR0 393 aaPredicted RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 OR10H4Q8NGA5 316 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 OR8D4Q8NGM9 314 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 SMAP2Q8WU79 429 aaPredicted RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 MCHR1Q99705 422 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 DPEP2Q9H4A9 486 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 MAT2BQ9NZL9 334 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 EXTL2Q9UBQ6 330 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 ICKQ9UPZ9 632 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 GPR55Q9Y2T6 319 aaPredicted RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 ALG5Q9Y673 324 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 MN1Q10571 1320 aaPredicted RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 DSPPQ9NZW4 1301 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 CDK2AP1O14519 115 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 SOCS6O14544 535 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 PLA2G10O15496 165 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 AKR7A2O43488 359 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 ACP2P11117 423 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 FUT1P19526 365 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 DDOSTP39656 456 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 ANXA11P50995 505 aaKnown RBP11.88□□□□□ -0.51
LIG1-201ENST00000263274 GPLD1P80108 840 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 SLC3A1Q07837 685 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 C6orf132Q5T0Z8 1188 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 C19orf48Q6RUI8 117 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 MTSS1LQ765P7 747 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 RASGRP3Q8IV61 690 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 ZCCHC10Q8TBK6 192 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 TMEM163Q8TC26 289 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 PPP1R16AQ96I34 528 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 SAMD8Q96LT4 415 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 LRRC3BQ96PB8 259 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 BEX1Q9HBH7 125 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 SEMA4GQ9NTN9 838 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 MCUBQ9NWR8 336 aa11.88□□□□□ -0.51
LIG1-201ENST00000263274 ZNF222Q9UK12 451 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms