RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PINK1Q9BXM7 581 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 MTHFD2LQ9H903 347 aaPredicted RBP21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 PRODH2Q9UF12 536 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 OTOGLQ3ZCN5 2332 aa21.26■□□□□ 0.99
SMARCB1-201ENST00000263121 C7orf72A4D263 438 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 TTC36A6NLP5 189 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 G3V2T6 193 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 EI24O14681 340 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 STX11O75558 287 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 EPPINO95925 133 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 ITIH1P19827 911 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 STPG1Q5TH74 334 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 MRPL14Q6P1L8 145 aaKnown RBP21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 NPSR1Q6W5P4 371 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 LANCL3Q6ZV70 420 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 HMGN2P46Q86SG4 172 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 GLRX5Q86SX6 157 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 ZDHHC13Q8IUH4 622 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 SLC2A12Q8TD20 617 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 ZNF721Q8TF20 911 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 LIN37Q96GY3 246 aaPredicted RBP21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 SPSB2Q99619 263 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 SOX17Q9H6I2 414 aaPredicted RBP21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 AKIRIN1Q9H9L7 192 aaPredicted RBP21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 MKLN1Q9UL63 735 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 ENPP4Q9Y6X5 453 aa21.25■□□□□ 0.99
SMARCB1-201ENST00000263121 IDSB3KWA1 339 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 FOXD2O60548 495 aaPredicted RBP21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 IFNW1P05000 195 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 GUSBP08236 651 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 TRHRP34981 398 aaPredicted RBP21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 ETV5P41161 510 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 HSPA13P48723 471 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 CLDN6P56747 220 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 RAB15P59190 212 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 ZNF619Q8N2I2 560 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 ZNF321PQ8N8H1 164 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 DAZLQ92904 295 aaKnown RBP21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 NAF1Q96HR8 494 aaKnown RBP21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 ITPAQ9BY32 194 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 ULBP3Q9BZM4 244 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 POLE3Q9NRF9 147 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 FBXO34Q9NWN3 711 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 MAGED1Q9Y5V3 778 aaPredicted RBP21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 SYT5O00445 386 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 KIAA0513O60268 411 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 CSO75390 466 aaKnown RBP21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 E2F6O75461 281 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 DNAJB5O75953 348 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 KCNK2O95069 426 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 LGI1O95970 557 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 HEXBP07686 556 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 CT45A8P0DMV1 189 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 CT45A9P0DMV2 189 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 RPS4Y1P22090 263 aaKnown RBP21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 PPP1R8Q12972 351 aaKnown RBP21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 CT45A2Q5DJT8 189 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 ZNF311Q5JNZ3 666 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 SHQ1Q6PI26 577 aaKnown RBP21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 DHRS4L2Q6PKH6 230 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 RAB11FIP2Q7L804 512 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 CARM1Q86X55 608 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 VRK2Q86Y07 508 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 OR4D11Q8NGI4 311 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 OR52P1PQ8NH57 321 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 PMM1Q92871 262 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 ART5Q96L15 291 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 ZNF570Q96NI8 536 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 SLC46A1Q96NT5 459 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 OR8D2Q9GZM6 311 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 U3KQV3 271 aa21.24■□□□□ 0.99
SMARCB1-201ENST00000263121 DLGAP1O14490 977 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 BRINP1O60477 761 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 MT-CO3P00414 261 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 CYC1P08574 325 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 UQCRBP14927 111 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 PRKAR1BP31321 381 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 DNAJA1P31689 397 aaKnown RBP21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 TRIP6Q15654 476 aaKnown RBP21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 DCAF12Q5T6F0 453 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 FIGNL1Q6PIW4 674 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 ZNF517Q6ZMY9 492 aaPredicted RBP21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 ANKRD37Q7Z713 158 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 ZNF605Q86T29 641 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 STK32CQ86UX6 486 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 HIPK1Q86Z02 1210 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 HS3ST5Q8IZT8 346 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 ZSCAN1Q8NBB4 408 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 RMND5BQ96G75 393 aaPredicted RBP21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 WFDC6Q9BQY6 131 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 REEP1Q9H902 201 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 WDR54Q9H977 334 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 RAB26Q9ULW5 256 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 LRCH1Q9Y2L9 728 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 GPR55Q9Y2T6 319 aaPredicted RBP21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 IFT52Q9Y366 437 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 SAMHD1Q9Y3Z3 626 aaKnown RBP21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 CHST2Q9Y4C5 530 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 B3GALT1Q9Y5Z6 326 aa21.23■□□□□ 0.99
SMARCB1-201ENST00000263121 KIF26BQ2KJY2 2108 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms