RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 DTX4Q9Y2E6 619 aa19.15■□□□□ 0.66
RTCA-201ENST00000260563 BMP2P12643 396 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 ANXA11P50995 505 aaKnown RBP19.14■□□□□ 0.65
RTCA-201ENST00000260563 TXNL4AP83876 142 aaKnown RBP19.14■□□□□ 0.65
RTCA-201ENST00000260563 MS4A2Q01362 244 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 ADRM1Q16186 407 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 FXNQ16595 210 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 LINC00303Q3SY05 128 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 GCNT6Q5T4J0 391 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 ABHD17BQ5VST6 288 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 C1orf146Q5VVC0 180 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 MFSD12Q6NUT3 480 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 ERICH5Q6P6B1 374 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 ISLR2Q6UXK2 745 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 PTRH1Q86Y79 214 aaKnown RBP19.14■□□□□ 0.65
RTCA-201ENST00000260563 ZZZ3Q8IYH5 903 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 MICU2Q8IYU8 434 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 TTC9Q92623 222 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 YIPF4Q9BSR8 244 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 LIN28AQ9H9Z2 209 aaKnown RBP19.14■□□□□ 0.65
RTCA-201ENST00000260563 ABI3Q9P2A4 366 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 MYOTQ9UBF9 498 aa19.14■□□□□ 0.65
RTCA-201ENST00000260563 CACNA1GO43497 2377 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 HMGN4O00479 90 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 NME6O75414 186 aaPredicted RBP19.13■□□□□ 0.65
RTCA-201ENST00000260563 MLF1P58340 268 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 TRAP1Q12931 704 aaKnown RBP19.13■□□□□ 0.65
RTCA-201ENST00000260563 KCNAB2Q13303 367 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 VMACQ2NL98 169 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 ACER2Q5QJU3 275 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 CDC73Q6P1J9 531 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 ZCCHC12Q6PEW1 402 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 LINC00696Q6ZRV3 163 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 PTOV1Q86YD1 416 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 ARMC10Q8N2F6 343 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 C17orf47Q8NEP4 570 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 OR5D16Q8NGK9 328 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 WDR60Q8WVS4 1066 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 JADE3Q92613 823 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 VSTM2LQ96N03 204 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 SMAD5Q99717 465 aaKnown RBP19.13■□□□□ 0.65
RTCA-201ENST00000260563 MUC13Q9H3R2 512 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 TMEM38AQ9H6F2 299 aa19.13■□□□□ 0.65
RTCA-201ENST00000260563 THUMPD1Q9NXG2 353 aaKnown RBP19.13■□□□□ 0.65
RTCA-201ENST00000260563 TMEM200CA6NKL6 621 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 WWP2O00308 870 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 ACOT8O14734 319 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 ASNA1O43681 348 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 ITGA10O75578 1167 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 OR12D1P0DN82 309 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 DCAF7P61962 342 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 MFAP5Q13361 173 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 ZNHIT3Q15649 155 aaPredicted RBP19.12■□□□□ 0.65
RTCA-201ENST00000260563 ZNF441Q8N8Z8 693 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 CDRT4Q8N9R6 151 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 FBXO30Q8TB52 745 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 RAB8BQ92930 207 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 MAL2Q969L2 176 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 ADIPOR1Q96A54 375 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 OR7D2Q96RA2 312 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 ADNPQ9H2P0 1102 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 ITPR1Q14643 2758 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 ATMQ13315 3056 aa19.12■□□□□ 0.65
RTCA-201ENST00000260563 DUXAA6NLW8 204 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 H0YHG0 523 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 ERVH48-1M5A8F1 160 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 GSTA4O15217 222 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 MAN1A2O60476 641 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 OR2J2O76002 312 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 STAMBPO95630 424 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 FAM87AP0C7U9 286 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 GGT1P19440 569 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 MAN2A2P49641 1150 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 NR0B1P51843 470 aaKnown RBP19.11■□□□□ 0.65
RTCA-201ENST00000260563 RBBP4Q09028 425 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 FLOT2Q14254 428 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 NNATQ16517 81 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 C16orf47Q6ZP98 133 aaPredicted RBP19.11■□□□□ 0.65
RTCA-201ENST00000260563 DHFR2Q86XF0 187 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 BEST3Q8N1M1 668 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 C11orf65Q8NCR3 313 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 SLC22A8Q8TCC7 542 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 ADAMTS15Q8TE58 950 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 TP53INP1Q96A56 240 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 OTUB1Q96FW1 271 aaPredicted RBP19.11■□□□□ 0.65
RTCA-201ENST00000260563 ABHD17AQ96GS6 310 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 LCORQ96JN0 433 aaPredicted RBP19.11■□□□□ 0.65
RTCA-201ENST00000260563 BTBD9Q96Q07 612 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 DENND2DQ9H6A0 471 aaPredicted RBP19.11■□□□□ 0.65
RTCA-201ENST00000260563 MAGEL2Q9UJ55 1249 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 TUBD1Q9UJT1 453 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 YARS2Q9Y2Z4 477 aaKnown RBP19.11■□□□□ 0.65
RTCA-201ENST00000260563 SNX13Q9Y5W8 968 aa19.11■□□□□ 0.65
RTCA-201ENST00000260563 ARPC2O15144 300 aa19.1■□□□□ 0.65
RTCA-201ENST00000260563 ARAFP10398 606 aa19.1■□□□□ 0.65
RTCA-201ENST00000260563 NCK1P16333 377 aa19.1■□□□□ 0.65
RTCA-201ENST00000260563 SSR4P51571 173 aa19.1■□□□□ 0.65
RTCA-201ENST00000260563 KPNB1Q14974 876 aaKnown RBP19.1■□□□□ 0.65
RTCA-201ENST00000260563 ZNF630Q2M218 657 aaPredicted RBP19.1■□□□□ 0.65
RTCA-201ENST00000260563 EXOSC6Q5RKV6 272 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms