RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ITGAMP11215 1152 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ACTC1P68032 377 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ACTA1P68133 377 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 LRIT3Q3SXY7 679 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 TP53I3Q53FA7 332 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 PAN3Q58A45 887 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 TTLQ8NG68 377 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 TMEM40Q8WWA1 233 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 CHFRQ96EP1 664 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 TBL1XR1Q9BZK7 514 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 SMIM3Q9BZL3 60 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 C11orf54Q9H0W9 315 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 MYNNQ9NPC7 610 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ASB4Q9Y574 426 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 A0A1W2PPL8 197 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 RTCAO00442 366 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 JRKO75564 520 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 FKBP1BP68106 108 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 RCAN2Q14206 197 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 LYPD4Q6UWN0 246 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 B3GLCTQ6Y288 498 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 IFNL1Q8IU54 200 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR52E2Q8NGJ4 325 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR5D16Q8NGK9 328 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 C2CD4CQ8TF44 421 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 METTL21AQ8WXB1 218 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 GMLQ99445 158 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 FZD3Q9NPG1 666 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 CSNK1G3Q9Y6M4 447 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 SIX6O95475 246 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 HOXD11P31277 338 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 FCN2Q15485 313 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ADPRMQ3LIE5 342 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 PLEKHS1Q5SXH7 462 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 PM20D1Q6GTS8 502 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 GDPGP1Q6ZNW5 385 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 C6orf120Q7Z4R8 191 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 HUS1BQ8NHY5 278 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 MZB1Q8WU39 189 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 FRZBQ92765 325 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 TMEM19Q96HH6 336 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 SNX18Q96RF0 628 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ALG8Q9BVK2 526 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 CARS2Q9HA77 564 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 NPAP1Q9NZP6 1156 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 KCNK6Q9Y257 313 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 GPR45Q9Y5Y3 372 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 CARNS1A5YM72 827 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 SLC22A31A6NKX4 558 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 TLX3O43711 291 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 RAD1O60671 282 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 IFNA10P01566 189 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 IFNA4P05014 189 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 JUPP14923 745 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 RAB5CP51148 216 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 PIN1Q13526 163 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 METTL2BQ6P1Q9 378 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF783Q6ZMS7 281 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 LRRTM4Q86VH4 590 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 TEX19Q8NA77 164 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR5W2Q8NH69 310 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 SAMD11Q96NU1 681 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 PHB2Q99623 299 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 WDR26Q9H7D7 661 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 FBXL2Q9UKC9 423 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ERVW-1Q9UQF0 538 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 A0A0U1RQK1 487 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 SULT1C2O00338 296 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 RNF13O43567 381 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 CACNG3O60359 315 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 IFNA5P01569 189 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ERCC1P07992 297 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 RD3LP0DJH9 198 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 MAOAP21397 527 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 S1PR1P21453 382 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 IDUAP35475 653 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 TMEM107Q6UX40 140 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR4K13Q8NH42 304 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 COL14A1Q05707 1796 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 M0R3H8 397 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 FADS1O60427 444 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 FGF19O95750 216 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 UGT2B7P16662 529 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 BDKRB2P30411 391 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 AFF3P51826 1226 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 RAB4BP61018 213 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 CRYZQ08257 329 aaKnown RBP9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 PTPRRQ15256 657 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 RGNQ15493 299 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.25□□□□□ -0.933e-6■■■□□ 15.4
CTDSPL2-201ENST00000260327 OR4E2Q8NGC2 313 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR1J4Q8NGS1 313 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 SMPDL3AQ92484 453 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 IL17FQ96PD4 163 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 OR2M4Q96R27 311 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 RNF32Q9H0A6 362 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 CERS4Q9HA82 394 aa9.25□□□□□ -0.93
CTDSPL2-201ENST00000260327 KCNJ16Q9NPI9 418 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms