RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 EXO1Q9UQ84 846 aaKnown RBP4.47□□□□□ -1.69
USP44-201ENST00000258499 NCKAP1Q9Y2A7 1128 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 PCDHGB2Q9Y5G2 931 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 SCN10AQ9Y5Y9 1956 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 BRCA2P51587 3418 aa4.47□□□□□ -1.69
USP44-201ENST00000258499 TDRD15B5MCY1 1934 aaKnown RBP4.46□□□□□ -1.69
USP44-201ENST00000258499 ANTXRLA6NF34 631 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 HEPACAM2A8MVW5 462 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 H3BQ06 376 aaPredicted RBP4.46□□□□□ -1.69
USP44-201ENST00000258499 RFXAPO00287 272 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 SLC35G6P0C7Q6 338 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 HPGDP15428 266 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 DRD5P21918 477 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 CMPK1P30085 196 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 IRS1P35568 1242 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 NAA10P41227 235 aaPredicted RBP4.46□□□□□ -1.69
USP44-201ENST00000258499 LTB4RQ15722 352 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 C11orf88Q6PI97 169 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 RNF165Q6ZSG1 346 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 VASH1Q7L8A9 365 aaPredicted RBP4.46□□□□□ -1.69
USP44-201ENST00000258499 CEACAM19Q7Z692 300 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 RANBP3LQ86VV4 465 aaPredicted RBP4.46□□□□□ -1.69
USP44-201ENST00000258499 NATD1Q8N6N6 113 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 ACBD7Q8N6N7 88 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 ACOT4Q8N9L9 421 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 BEST4Q8NFU0 473 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 OR56A1Q8NGH5 318 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 OR6F1Q8NGZ6 308 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 SLC7A6Q92536 515 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 TM9SF4Q92544 642 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 NXPE3Q969Y0 559 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 DNAJA3Q96EY1 480 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 LRIG1Q96JA1 1093 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 PRRC1Q96M27 445 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 BARHL1Q9BZE3 327 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 PLA2G12AQ9BZM1 189 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 ZDHHC5Q9C0B5 715 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 DPEP2Q9H4A9 486 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 NUDT15Q9NV35 164 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 CALML5Q9NZT1 146 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 TBC1D24Q9ULP9 559 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 ATG4BQ9Y4P1 393 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 RALGAPA2Q2PPJ7 1873 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 MYO16Q9Y6X6 1858 aa4.46□□□□□ -1.69
USP44-201ENST00000258499 TNS1Q9HBL0 1735 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 OTOFQ9HC10 1997 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 LOC285556D6RIA3 1793 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 MYLKQ15746 1914 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 GREB1Q4ZG55 1949 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 A0A087WUU8 490 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ZC3H12DA2A288 527 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 CACNB4O00305 520 aaPredicted RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 SOCS6O14544 535 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 POLR1CO15160 346 aaPredicted RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 MID1O15344 667 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 VEGFDO43915 354 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 LCMT2O60294 686 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 HCN1O60741 890 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 UBXN7O94888 489 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 RASGRP1O95267 797 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 SLC2A10O95528 541 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 IGHA2P01877 340 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 CSF3P09919 207 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 CEBPBP17676 345 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 NDUFV2P19404 249 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ERP29P30040 261 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 ACTR1BP42025 376 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 SLC1A3P43003 542 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 MVDP53602 400 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ATP12AP54707 1039 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ACTR1AP61163 376 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 STXBP1P61764 594 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 HTRA3P83110 453 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ZNF234Q14588 700 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ANGPT1Q15389 498 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 P2RY14Q15391 338 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 NNATQ16517 81 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 PPP2R2DQ66LE6 453 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 POMZP3Q6PJE2 187 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 LCTLQ6UWM7 567 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 LINGO2Q7L985 606 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 TSEN54Q7Z6J9 526 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 TECPR1Q7Z6L1 1165 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ADGRD2Q7Z7M1 963 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 NRSN1Q8IZ57 195 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ELMOD2Q8IZ81 293 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 GJD3Q8N144 294 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 TOMM5Q8N4H5 51 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 LINC00471Q8N535 108 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ANKRD53Q8N9V6 530 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 WFIKKN2Q8TEU8 576 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ZNF431Q8TF32 576 aaPredicted RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 RFT1Q96AA3 541 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 SLC25A46Q96AG3 418 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 AMDHD1Q96NU7 426 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 SNX18Q96RF0 628 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 NDC1Q9BTX1 674 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 KATNB1Q9BVA0 655 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 POLDIP3Q9BY77 421 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 SRRQ9GZT4 340 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms