RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PITPNBP48739 271 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PDX1P52945 283 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RGS8P57771 180 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RPS13P62277 151 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SKP1P63208 163 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RPA4Q13156 261 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SNTA1Q13424 505 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ARHGAP19Q14CB8 494 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CEBPEQ15744 281 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 NTRK2Q16620 822 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SMN1Q16637 294 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 FLYWCH1Q4VC44 716 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PRAMEF14Q5SWL7 426 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PRAMEF13Q5VWM6 474 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CD300LDQ6UXZ3 194 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TMCO2Q7Z6W1 182 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 OAFQ86UD1 273 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM17Q86X19 198 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 NAGSQ8N159 534 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SNIP1Q8TAD8 396 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PYCR2Q96C36 320 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 COX14Q96I36 57 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 MTERF1Q99551 399 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 P2RY13Q9BPV8 354 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 MCCC2Q9HCC0 563 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 KLHL1Q9NR64 748 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ACOXLQ9NUZ1 547 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CYB5R1Q9UHQ9 305 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ACSL5Q9ULC5 683 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 FCF1Q9Y324 198 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 FKBP7Q9Y680 259 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CACNG2Q9Y698 323 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF780BQ9Y6R6 833 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 DOCK9Q9BZ29 2069 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ARPC4-TTLL3A0A0A6YYG9 625 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 B4DXG7 233 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 L7N2F9 121 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 MEN1O00255 615 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ICMTO60725 284 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF432O94892 652 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CLDN7O95471 211 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PAHP00439 452 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 AK1P00568 194 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TGFB1P01137 390 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 DNTTP04053 509 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CYP17A1P05093 508 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 IDSP22304 550 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SPINT3P49223 89 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CCR8P51685 355 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ACTA2P62736 377 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ACTG2P63267 376 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ATP13A5Q4VNC0 1218 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ATXN7L2Q5T6C5 722 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 IDNKQ5T6J7 187 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 HBMQ6B0K9 141 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 FAAH2Q6GMR7 532 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 C22orf42Q6IC83 251 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RTL10Q7L3V2 364 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PIAS4Q8N2W9 510 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ACBD7Q8N6N7 88 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SLAIN1Q8ND83 568 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 C16orf78Q8WTQ4 265 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SMPDL3AQ92484 453 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RSPRY1Q96DX4 576 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 HS6ST2Q96MM7 605 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 DPYSL5Q9BPU6 564 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PELOQ9BRX2 385 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SLC46A2Q9BY10 475 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ABCG5Q9H222 651 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RPS6KB2Q9UBS0 482 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CCL26Q9Y258 94 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TP53BP1Q12888 1972 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PRNPP04156 253 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 BCHEP06276 602 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ARSBP15848 533 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PRKCAP17252 672 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PPM1AP35813 382 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 STK19P49842 368 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PRMT2P55345 433 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 LAPTM4AQ15012 233 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TCEA2Q15560 299 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 HLA-DQA1Q5Y7H0 255 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 C11orf88Q6PI97 169 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 LCTLQ6UWM7 567 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TMIGD1Q6UXZ0 262 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SLC39A5Q6ZMH5 540 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 QSOX2Q6ZRP7 698 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 FAM129CQ86XR2 697 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SLC22A15Q8IZD6 547 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 NAT16Q8N8M0 369 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SYT14Q8NB59 555 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 VN1R2Q8NFZ6 395 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 OR2T33Q8NG76 320 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 OR5H6Q8NGV6 325 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 OR56B4Q8NH76 319 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CREB3L4Q8TEY5 395 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 LRR1Q96L50 414 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 LRFN5Q96NI6 719 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SARGQ9BW04 601 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF436Q9C0F3 470 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms