RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZNF730Q6ZMV8 503 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 FRRS1Q6ZNA5 592 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 GDPGP1Q6ZNW5 385 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 MRGPREQ86SM8 312 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 NKAIN4Q8IVV8 208 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 OR52P1PQ8NH57 321 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 NT5CQ8TCD5 201 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 ADAMTS15Q8TE58 950 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 SLC9A6Q92581 669 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 CDS1Q92903 461 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 CALML5Q9NZT1 146 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 ARHGEF17Q96PE2 2063 aaPredicted RBP18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 HYKKA2RU49 373 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 ZNF670-ZNF695F2Z2N8 137 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 UBXN7O94888 489 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 KCNK2O95069 426 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 NDUFS1P28331 727 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 ACTR1BP42025 376 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 TGM4P49221 684 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 ACTR1AP61163 376 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 ST3GAL3Q11203 375 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 DEFB134Q4QY38 66 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 CLEC12AQ5QGZ9 265 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 TRIM69Q86WT6 500 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 SHISA5Q8N114 240 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 LRRC25Q8N386 305 aaPredicted RBP18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 BMFQ96LC9 184 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 OR2A14Q96R47 310 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 OR2A5Q96R48 311 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 NKX2-4Q9H2Z4 354 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 SMURF1Q9HCE7 757 aa18.28■□□□□ 0.52
CDC42EP1-201ENST00000249014 HOXC4P09017 264 aaPredicted RBP18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 CCNYL3P0C7X3 344 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 CPN2P22792 545 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 PRKAR1BP31321 381 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 TNFSF8P32971 234 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 SOX18P35713 384 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 EIF2B2P49770 351 aaKnown RBP18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 SIM1P81133 766 aaPredicted RBP18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 RUNX2Q13950 521 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 FAM214AQ32MH5 1076 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 OR2G6Q5TZ20 316 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 HPS1Q92902 700 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 TM4SF19Q96DZ7 209 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 SIPA1Q96FS4 1042 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 INIPQ9NRY2 104 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 SNTG1Q9NSN8 517 aa18.27■□□□□ 0.52
CDC42EP1-201ENST00000249014 PNMA8CA0A1B0GUJ8 204 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 PRODHO43272 600 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 DLGAP3O95886 979 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 SLC35G6P0C7Q6 338 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 SMIM10L1P0DMW3 83 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 PRRT3Q5FWE3 981 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 SLC36A4Q6YBV0 504 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 RASSF6Q6ZTQ3 369 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 RNFT2Q96EX2 444 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 SMIM10Q96HG1 83 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 WDR92Q96MX6 357 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 MS4A4EQ96PG1 132 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 SLC30A2Q9BRI3 323 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 KLHL25Q9H0H3 589 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 MRPS18AQ9NVS2 196 aaKnown RBP18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 NTMQ9P121 344 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 PCOLCE2Q9UKZ9 415 aa18.27■□□□□ 0.51
CDC42EP1-201ENST00000249014 A6NCN8 305 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 PLD2O14939 933 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 ACP2P11117 423 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 CPEP16870 476 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 ACSL1P33121 698 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 IFNGR2P38484 337 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 RGS8P57771 180 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 C3orf38Q5JPI3 329 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 TMEM31Q5JXX7 168 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 PPP2R2DQ66LE6 453 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 FCRL6Q6DN72 434 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 CDC73Q6P1J9 531 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 ASB12Q8WXK4 309 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 TM9SF4Q92544 642 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 NR4A3Q92570 626 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 ERVK13-1Q9NX77 482 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 ANKMY1Q9P2S6 941 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 CRNNQ9UBG3 495 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 KLHL3Q9UH77 587 aa18.26■□□□□ 0.51
CDC42EP1-201ENST00000249014 CENPVL1A0A0U1RR11 272 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 LRRTM2O43300 516 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 RASGRP1O95267 797 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 PTTG1O95997 202 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 GNSP15586 552 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 UGT2B7P16662 529 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 TFF2Q03403 129 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 PUS10Q3MIT2 529 aaKnown RBP18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 KLHL22Q53GT1 634 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 TYW3Q6IPR3 259 aaKnown RBP18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 SHFQ7M4L6 423 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 GJD3Q8N144 294 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 OR2L13Q8N349 312 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 ANKK1Q8NFD2 765 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 OR4K14Q8NGD5 310 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 DOK4Q8TEW6 326 aa18.25■□□□□ 0.51
CDC42EP1-201ENST00000249014 TMEM203Q969S6 136 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms