RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 CPTPQ5TA50 214 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 FNDC7Q5VTL7 733 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 BICRALQ6AI39 1079 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 OGFOD2Q6N063 350 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 HDXQ7Z353 690 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 DOLPP1Q86YN1 238 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 RIMKLAQ8IXN7 391 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 ZNF808Q8N4W9 903 aaPredicted RBP11.69□□□□□ -0.54
VPREB3-201ENST00000248948 CDRT4Q8N9R6 151 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 CEP70Q8NHQ1 597 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 PSMA8Q8TAA3 256 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 SARAFQ96BY9 339 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 JSRP1Q96MG2 331 aaPredicted RBP11.69□□□□□ -0.54
VPREB3-201ENST00000248948 NODALQ96S42 347 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 SH3GL2Q99962 352 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 NUF2Q9BZD4 464 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 DEFB127Q9H1M4 99 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 AKTIPQ9H8T0 292 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 C3orf14Q9HBI5 128 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 MRTO4Q9UKD2 239 aaKnown RBP11.69□□□□□ -0.54
VPREB3-201ENST00000248948 ABCG2Q9UNQ0 655 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 WIF1Q9Y5W5 379 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 A0A1W2PRB8 838 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 TRPC5OSA6NMA1 111 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 FIGNL2A6NMB9 653 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 HDAC3O15379 428 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 EMC8O43402 210 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 REM1O75628 298 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 HPNP05981 417 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 CELA3AP09093 270 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 RFPL3SP0C7P2 107 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 LBPP18428 481 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 ENDOUP21128 410 aaKnown RBP11.68□□□□□ -0.54
VPREB3-201ENST00000248948 PTPN6P29350 595 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 MAP3K8P41279 467 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 DECR1Q16698 335 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 DPY19L1Q2PZI1 675 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 TIGD3Q6B0B8 471 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 MFSD12Q6NUT3 480 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 ZCCHC12Q6PEW1 402 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 LARP4Q71RC2 724 aaKnown RBP eCLIP11.68□□□□□ -0.54
VPREB3-201ENST00000248948 GOLGA6L1Q8N7Z2 621 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 OR7A2PQ8NGA2 310 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 OR1J4Q8NGS1 313 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 NEIL3Q8TAT5 605 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 ITLN2Q8WWU7 325 aaPredicted RBP11.68□□□□□ -0.54
VPREB3-201ENST00000248948 OR5P2Q8WZ92 322 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 MOAP1Q96BY2 351 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 COQ8BQ96D53 544 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 PPP1R36Q96LQ0 422 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 DMRTA2Q96SC8 542 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 ADOQ96SZ5 270 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 MANSC1Q9H8J5 431 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 SIRT3Q9NTG7 399 aaPredicted RBP11.68□□□□□ -0.54
VPREB3-201ENST00000248948 CBLCQ9ULV8 474 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 PCDHGB3Q9Y5G1 929 aa11.68□□□□□ -0.54
VPREB3-201ENST00000248948 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 A1L4Q6 167 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 WDR1O75083 606 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 ICOSLGO75144 302 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 NME6O75414 186 aaPredicted RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 PDE9AO76083 593 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 NKX2-2O95096 273 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 KCNH1O95259 989 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 CLDN1O95832 211 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 LAMP1P11279 417 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 EVI2BP34910 448 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 PRIM2P49643 509 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 SMSP52788 366 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 CLNS1AP54105 237 aaKnown RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 ADORA2A-AS1P86434 159 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 LSM12Q3MHD2 195 aaKnown RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 TTMPQ5BVD1 217 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 EXOSC6Q5RKV6 272 aaKnown RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 ANGPTL8Q6UXH0 198 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 SZRD1Q7Z422 152 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 KRTCAP2Q8N6L1 136 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 NUP43Q8NFH3 380 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 OR4N2Q8NGD1 307 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 OR8J2Q8NGG1 315 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 OR56A1Q8NGH5 318 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 SFXN5Q8TD22 340 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 ARL8AQ96BM9 186 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 TESCQ96BS2 214 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 EFHD2Q96C19 240 aaPredicted RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 FAM120BQ96EK7 910 aaKnown RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 GIMAP5Q96F15 307 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 DUSP26Q9BV47 211 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 LDAHQ9H6V9 325 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 EXO5Q9H790 373 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 GALNT9Q9HCQ5 603 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 EQTNQ9NQ60 294 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 ZCCHC3Q9NUD5 404 aaKnown RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 PNPOQ9NVS9 261 aa11.67□□□□□ -0.54
VPREB3-201ENST00000248948 FAM120CQ9NX05 1096 aaKnown RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 KLF2Q9Y5W3 355 aaPredicted RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 NUP214P35658 2090 aaPredicted RBP11.67□□□□□ -0.54
VPREB3-201ENST00000248948 NBPF19A0A087WUL8 3843 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms