RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 SF3B4Q15427 424 aaKnown RBP eCLIP12.56□□□□□ -0.46e-8■■■□□ 17.7
DDX39A-201ENST00000242776 FNDC7Q5VTL7 733 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 ZNF781Q8N8C0 355 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 METTL6Q8TCB7 284 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 AGR3Q8TD06 166 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 UCN3Q969E3 161 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 PIGQQ9BRB3 760 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 TBCDQ9BTW9 1192 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 MS4A8Q9BY19 250 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 ROGDIQ9GZN7 287 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 OR51B5Q9H339 312 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 PFDN4Q9NQP4 134 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 KLHL28Q9NXS3 571 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 HAO1Q9UJM8 370 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 ZNF225Q9UK10 706 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 FIS1Q9Y3D6 152 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 WIF1Q9Y5W5 379 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 SLCO1B7G3V0H7 640 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 H0Y3Z8 333 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 TP53I11O14683 189 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 SIAH2O43255 324 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 SMNDC1O75940 238 aaKnown RBP eCLIP12.55□□□□□ -0.47e-7■■□□□ 13.3
DDX39A-201ENST00000242776 VIMP08670 466 aaKnown RBP12.55□□□□□ -0.4
DDX39A-201ENST00000242776 ARRB2P32121 409 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 GYS2P54840 703 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 GNGT1P63211 74 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 IGLV3-21P80748 117 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-201ENST00000242776 RPS6KA2Q15349 733 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 KANK2Q63ZY3 851 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 DESI1Q6ICB0 168 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 WDR75Q8IWA0 830 aaKnown RBP12.55□□□□□ -0.4
DDX39A-201ENST00000242776 LAS2Q8IYD9 372 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 DND1Q8IYX4 353 aaKnown RBP12.55□□□□□ -0.4
DDX39A-201ENST00000242776 TAGAPQ8N103 731 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 FAM83FQ8NEG4 500 aaPredicted RBP12.55□□□□□ -0.4
DDX39A-201ENST00000242776 PIWIL2Q8TC59 973 aaKnown RBP12.55□□□□□ -0.4
DDX39A-201ENST00000242776 SPPL2AQ8TCT8 520 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 SMPDL3BQ92485 455 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 RIT1Q92963 219 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 PIGTQ969N2 578 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 ZC3HAV1LQ96H79 300 aaKnown RBP12.55□□□□□ -0.4
DDX39A-201ENST00000242776 C20orf27Q9GZN8 174 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 CALHM2Q9HA72 323 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDX39A-201ENST00000242776 NDRG3Q9UGV2 375 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 ZDHHC2Q9UIJ5 367 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 TSC22D4Q9Y3Q8 395 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 TRAF6Q9Y4K3 522 aa12.55□□□□□ -0.4
DDX39A-201ENST00000242776 C2orf92A0A1B0GVN3 265 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 A0A1W2PS29 197 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 EDF1O60869 148 aaKnown RBP12.54□□□□□ -0.4
DDX39A-201ENST00000242776 ULK1O75385 1050 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 GOSR1O95249 250 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 IL18BPO95998 194 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 RAP1GDS1P52306 607 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 NR1H2P55055 460 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 HNRNPH2P55795 449 aaKnown RBP12.54□□□□□ -0.4
DDX39A-201ENST00000242776 SLC37A1P57057 533 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 FAM27E3Q08E93 113 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 NNATQ16517 81 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 TBCELQ5QJ74 424 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 HLA-DQA1Q5Y7H0 255 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 FRG2Q64ET8 278 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 CLEC6AQ6EIG7 209 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 ANGPTL8Q6UXH0 198 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 LRRC75A-AS1Q8N1F1 130 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 SRFBP1Q8NEF9 429 aaKnown RBP12.54□□□□□ -0.4
DDX39A-201ENST00000242776 OR7G3Q8NG95 312 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 ZNF473Q8WTR7 871 aaKnown RBP12.54□□□□□ -0.4
DDX39A-201ENST00000242776 SELENOMQ8WWX9 145 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 FRG2BQ96QU4 278 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 KCNA7Q96RP8 456 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 CCT7Q99832 543 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 NSRP1Q9H0G5 558 aaKnown RBP12.54□□□□□ -0.4
DDX39A-201ENST00000242776 UBQLN3Q9H347 655 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 SLCO1B3Q9NPD5 702 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 MAPRE3Q9UPY8 281 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 TESMINQ9Y4I5 508 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 NPFFR2Q9Y5X5 522 aa12.54□□□□□ -0.4
DDX39A-201ENST00000242776 MANBAO00462 879 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 CNOT4O95628 575 aaKnown RBP12.53□□□□□ -0.4
DDX39A-201ENST00000242776 CLPSP04118 112 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 TROVE2P10155 538 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDX39A-201ENST00000242776 HSD3B1P14060 373 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 HSD3B2P26439 372 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 LSP1P33241 339 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 PIK3CBP42338 1070 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 CASP3P42574 277 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 STARP49675 285 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 FOXA1P55317 472 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 TNFRSF17Q02223 184 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 CSTF3Q12996 717 aaKnown RBP12.53□□□□□ -0.4
DDX39A-201ENST00000242776 ACKR1Q16570 336 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 OR4C11Q6IEV9 310 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 RNF165Q6ZSG1 346 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 GPR180Q86V85 440 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 WDR20Q8TBZ3 569 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 TWIST2Q8WVJ9 160 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 CHMP6Q96FZ7 201 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms