RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ZBTB37Q5TC79 503 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 LIMS2Q7Z4I7 341 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 OAFQ86UD1 273 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 SPAG16Q8N0X2 631 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 COQ8AQ8NI60 647 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 RNASE11Q8TAA1 199 aaKnown RBP10.41□□□□□ -0.74
COPA-201ENST00000241704 SLC22A8Q8TCC7 542 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 SLC25A36Q96CQ1 311 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 ZNF285Q96NJ3 590 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 PKP4Q99569 1192 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 POLR2J3Q9H1A7 115 aaKnown RBP10.41□□□□□ -0.74
COPA-201ENST00000241704 MED11Q9P086 117 aa10.41□□□□□ -0.74
COPA-201ENST00000241704 RIIAD1A6NNX1 92 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 WWP2O00308 870 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 UGDHO60701 494 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 HTR1AP08908 422 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 HOXC8P31273 242 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 FOXA1P55317 472 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 DEFB133Q30KQ1 61 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 LAX1Q8IWV1 398 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 LGI4Q8N135 537 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 CSNK1A1LQ8N752 337 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 CEP76Q8TAP6 659 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 ARMC5Q96C12 935 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 ZNF578Q96N58 590 aaPredicted RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 DCLRE1CQ96SD1 692 aaKnown RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 APOOQ9BUR5 198 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 BRD7Q9NPI1 651 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 POLE3Q9NRF9 147 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 LYARQ9NX58 379 aaKnown RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 UBE2QL1A1L167 161 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 B4DXG7 233 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 TOR1AO14656 332 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 FABP7O15540 132 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 TPST2O60704 377 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 CCR7P32248 378 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 TRIM23P36406 574 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 RAB28P51157 221 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 GANABQ14697 944 aaKnown RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 OR5P2Q8WZ92 322 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 UFD1Q92890 307 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 OR2A14Q96R47 310 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 HRH3Q9Y5N1 445 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 GLOD5A6NK44 160 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 SSX4O60224 188 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 PCDHGA12O60330 932 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 CER1O95813 267 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 TGM6O95932 706 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 IGLV3-27P01718 113 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 FBLP22087 321 aaKnown RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 GRM7Q14831 915 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 SF3A2Q15428 464 aaKnown RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 ZNF311Q5JNZ3 666 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 CTSL3PQ5NE16 218 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 PDSS1Q5T2R2 415 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 CCDC190Q86UF4 302 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 SLITRK4Q8IW52 837 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 BCL7CQ8WUZ0 217 aaPredicted RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 RNF31Q96EP0 1072 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 PELOQ9BRX2 385 aaKnown RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 MKKSQ9NPJ1 570 aaPredicted RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 RBFOX1Q9NWB1 397 aaKnown RBP10.4□□□□□ -0.74
COPA-201ENST00000241704 TRAPPC4Q9Y296 219 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 PRSS21Q9Y6M0 314 aa10.4□□□□□ -0.74
COPA-201ENST00000241704 SMIM30A4D0T7 59 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 ARNTLO00327 626 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 BET1O15155 118 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 WDPCPO95876 746 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 IL3P08700 152 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 UQCRC2P22695 453 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 KCNC1P48547 511 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 REEP3Q6NUK4 255 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 DENND6BQ8NEG7 585 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 OR4K14Q8NGD5 310 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 PCNPQ8WW12 178 aaKnown RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 GGHQ92820 318 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 EDAQ92838 391 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 TMEM80Q96HE8 168 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 CCDC115Q96NT0 180 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 MAPKAP1Q9BPZ7 522 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 RBM7Q9Y580 266 aaKnown RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 TPRP12270 2363 aaKnown RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 H7C0S8 307 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 PRAMEF12O95522 483 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 SBK3P0C264 359 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 RNH1P13489 461 aaKnown RBP10.39□□□□□ -0.75
COPA-201ENST00000241704 ARSBP15848 533 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 SPHARQ15513 63 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 AANATQ16613 207 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 VMACQ2NL98 169 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 GRHL2Q6ISB3 625 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 ZNF680Q8NEM1 530 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 PHOSPHO1Q8TCT1 267 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 NT5DC2Q9H857 520 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 C11orf16Q9NQ32 467 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 SLC39A1Q9NY26 324 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 PSORS1C1Q9UIG5 152 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 ZNF726A6NNF4 738 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 VSTM5A8MXK1 200 aa10.39□□□□□ -0.75
COPA-201ENST00000241704 TP53I11O14683 189 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms