RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RFT1Q96AA3 541 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 YIPF4Q9BSR8 244 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 SPATA5L1Q9BVQ7 753 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 ZDHHC5Q9C0B5 715 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 QRSL1Q9H0R6 528 aaKnown RBP14.56□□□□□ -0.08
DDX55-201ENST00000238146 GHITMQ9H3K2 345 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 GLIPR2Q9H4G4 154 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 ZCCHC3Q9NUD5 404 aaKnown RBP14.56□□□□□ -0.08
DDX55-201ENST00000238146 TDP1Q9NUW8 608 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 CBLCQ9ULV8 474 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 ZFR2Q9UPR6 939 aaKnown RBP14.56□□□□□ -0.08
DDX55-201ENST00000238146 C7orf66A4D0T2 115 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 K7ESM1 405 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 SURF4O15260 269 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 GNSP15586 552 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 CCNJQ5T5M9 372 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 ZNF322Q6U7Q0 402 aaPredicted RBP14.56□□□□□ -0.08
DDX55-201ENST00000238146 IL20RBQ6UXL0 311 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 ZNF655Q8N720 491 aaPredicted RBP14.56□□□□□ -0.08
DDX55-201ENST00000238146 BMPERQ8N8U9 685 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 AMER3Q8N944 861 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 OR11H4Q8NGC9 324 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 SCMH1Q96GD3 660 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 SLC46A2Q9BY10 475 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 CUEDC1Q9NWM3 386 aaPredicted RBP14.56□□□□□ -0.08
DDX55-201ENST00000238146 SLCO1C1Q9NYB5 712 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 SRRDQ9UH36 339 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 AUP1Q9Y679 476 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 PDE4DIPQ5VU43 2346 aa14.56□□□□□ -0.08
DDX55-201ENST00000238146 TRAV6A0A075B6T7 132 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 A0A1B0GVC2 190 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 A6NIN4 97 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 BTN3A3O00478 584 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 FRS3O43559 492 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 HRO43593 1189 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 LZTS3O60299 673 aaPredicted RBP14.55□□□□□ -0.08
DDX55-201ENST00000238146 PDGFAP04085 211 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 EIF4EP06730 217 aaKnown RBP14.55□□□□□ -0.08
DDX55-201ENST00000238146 PTGER1P34995 402 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 TAS2R41P59536 307 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 RAB8AP61006 207 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 ARHGEF6Q15052 776 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 CDONQ4KMG0 1287 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 ZNF805Q5CZA5 627 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 LRRC28Q86X40 367 aaPredicted RBP14.55□□□□□ -0.08
DDX55-201ENST00000238146 ZNF547Q8IVP9 402 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 OR8H3Q8N146 312 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 HEXA-AS1Q9H8Q6 139 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 ISG20L2Q9H9L3 353 aaKnown RBP14.55□□□□□ -0.08
DDX55-201ENST00000238146 ENAMQ9NRM1 1142 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 PTGFRNQ9P2B2 879 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 NUP210Q8TEM1 1887 aaPredicted RBP14.55□□□□□ -0.08
DDX55-201ENST00000238146 FEZF1A0PJY2 475 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 DHFRP00374 187 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 PRKACBP22694 351 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 IFNGR2P38484 337 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 OMPP47874 163 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 PRKAG1P54619 331 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 HBMQ6B0K9 141 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 OR5AR1Q8NGP9 310 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 AMDHD1Q96NU7 426 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 OSGEPL1Q9H4B0 414 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 RANBP3Q9H6Z4 567 aaPredicted RBP14.55□□□□□ -0.08
DDX55-201ENST00000238146 DDX31Q9H8H2 851 aaKnown RBP14.55□□□□□ -0.08
DDX55-201ENST00000238146 EMC7Q9NPA0 242 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 SEMA4GQ9NTN9 838 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 NUDT15Q9NV35 164 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 RNF186Q9NXI6 227 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 TAC3Q9UHF0 121 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 ZNF222Q9UK12 451 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 ASF1AQ9Y294 204 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 CACNG2Q9Y698 323 aa14.55□□□□□ -0.08
DDX55-201ENST00000238146 SIRT4Q9Y6E7 314 aaPredicted RBP14.55□□□□□ -0.08
DDX55-201ENST00000238146 PRR23AA6NEV1 266 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 POP7O75817 140 aaKnown RBP14.54□□□□□ -0.08
DDX55-201ENST00000238146 SCO1O75880 301 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 RAF1P04049 648 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 ENPP1P22413 925 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 GALP22466 123 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 AHCYP23526 432 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 STOMP27105 288 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 ATP6V1E1P36543 226 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 MTNR1BP49286 362 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 RGS1Q08116 209 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 MLC1Q15049 377 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 NTRK2Q16620 822 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 ARHGAP15Q53QZ3 475 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 SPOUT1Q5T280 376 aaKnown RBP14.54□□□□□ -0.08
DDX55-201ENST00000238146 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.54□□□□□ -0.08
DDX55-201ENST00000238146 BPHLQ86WA6 291 aaPredicted RBP14.54□□□□□ -0.08
DDX55-201ENST00000238146 C17orf64Q86WR6 236 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 NUDT13Q86X67 352 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 HSD17B8Q92506 261 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 KLK6Q92876 244 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 SCLYQ96I15 445 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 IL36AQ9UHA7 158 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 A0A0G2JN53 185 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 TEX51A0A1B0GUA7 166 aa14.54□□□□□ -0.08
DDX55-201ENST00000238146 CASC3O15234 703 aaKnown RBP14.54□□□□□ -0.08
DDX55-201ENST00000238146 EEF1E1O43324 174 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms