RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 BTG2P78543 158 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 TRA2AQ13595 282 aaKnown RBP eCLIP9.08□□□□□ -0.96
TTC1-201ENST00000231238 ZNF267Q14586 743 aaPredicted RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 EXOSC7Q15024 291 aaKnown RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 SYPL1Q16563 259 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 TRMT12Q53H54 448 aaKnown RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 ZNF628Q5EBL2 1059 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 OTUD3Q5T2D3 398 aaPredicted RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 HMBOX1Q6NT76 420 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 MFSD12Q6NUT3 480 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 CDC73Q6P1J9 531 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 CCDC80Q76M96 950 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 TMPRSS9Q7Z410 1059 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 STK32CQ86UX6 486 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 LGI4Q8N135 537 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 OR2L13Q8N349 312 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 CBR4Q8N4T8 237 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 COX18Q8N8Q8 333 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 CDRT4Q8N9R6 151 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 ZNF675Q8TD23 568 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 GPR151Q8TDV0 419 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 GEMIN6Q8WXD5 167 aaKnown RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 RNF31Q96EP0 1072 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 NAF1Q96HR8 494 aaKnown RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 REEP1Q9H902 201 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 TMEM9BQ9NQ34 198 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 C19orf53Q9UNZ5 99 aaPredicted RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 SH3GLB1Q9Y371 365 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 MMACHCQ9Y4U1 282 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 ORC6Q9Y5N6 252 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 A0A0G2JPF8 293 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 HNRNPCL2B2RXH8 293 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 HNRNPCL3B7ZW38 293 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 G3V2T6 193 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 POLR1CO15160 346 aaPredicted RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 PLOD3O60568 738 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 JRKO75564 520 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 IFNW1P05000 195 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 ALPPP05187 535 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 GP1BAP07359 652 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 FAM87AP0C7U9 286 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 HNRNPCL4P0DMR1 293 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 ATP6V1C1P21283 382 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 STT3AP46977 705 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 RFX3P48380 749 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 EEF1A2Q05639 463 aaKnown RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 NKG7Q16617 165 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 PRICKLE4Q2TBC4 344 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 SFT2D3Q587I9 215 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 CRB2Q5IJ48 1285 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 ZBTB37Q5TC79 503 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 OR2T5Q6IEZ7 315 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 RBM44Q6ZP01 1051 aaKnown RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 WDR53Q7Z5U6 358 aaPredicted RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 CYP4Z1Q86W10 505 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 NAXDQ8IW45 347 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 KBTBD2Q8IY47 623 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 SVOPLQ8N434 492 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 PACRGLQ8N7B6 248 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 OR52R1Q8NGF1 315 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 OR2T29Q8NH02 315 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 MIPOL1Q8TD10 442 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 MAGEE2Q8TD90 523 aaPredicted RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 TMBIM1Q969X1 311 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 TAMM41Q96BW9 452 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 TREX2Q9BQ50 279 aaPredicted RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 STRADBQ9C0K7 418 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 SERHL2Q9H4I8 314 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 IL1RAPQ9NPH3 570 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 MKKSQ9NPJ1 570 aaPredicted RBP9.08□□□□□ -0.96
TTC1-201ENST00000231238 KLHL28Q9NXS3 571 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 MAT2BQ9NZL9 334 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 KIF17Q9P2E2 1029 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 PDP2Q9P2J9 529 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 LRCH1Q9Y2L9 728 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 LRRC42Q9Y546 428 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 CLCA3PQ9Y6N3 262 aa9.08□□□□□ -0.96
TTC1-201ENST00000231238 ARID1BQ8NFD5 2236 aaPredicted RBP9.07□□□□□ -0.96
TTC1-201ENST00000231238 ASXL3Q9C0F0 2248 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 RP1P56715 2156 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 OR2W5A6NFC9 320 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 A8MUA0 341 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 PDLIM1O00151 329 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 PRAMEF2O60811 474 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 SOX30O94993 753 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 H6PDO95479 791 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 ZNF806P0C7X5 589 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 AGXTP21549 392 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 ACP1P24666 158 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 GABRA3P34903 492 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 ST13P50502 369 aaKnown RBP9.07□□□□□ -0.96
TTC1-201ENST00000231238 PCBP3P57721 371 aaKnown RBP9.07□□□□□ -0.96
TTC1-201ENST00000231238 SPIBQ01892 262 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 MAP4K2Q12851 820 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 MED21Q13503 144 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 IL11RAQ14626 422 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 MYBPC3Q14896 1274 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 NSDHLQ15738 373 aa9.07□□□□□ -0.96
TTC1-201ENST00000231238 CYP27C1Q4G0S4 372 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms