RNA–Protein interactions for RNA: ENST00000231134.7

PCDHB5-201, Transcript of protocadherin beta 5, humanhuman

APPRIS P1 BASIC

Gene PCDHB5, Length 3,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-201ENST00000231134 VGLL4Q14135 290 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 IQCHQ86VS3 1027 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 LMNTD1Q8N9Z9 388 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 OR6J1Q8NGC5 347 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 OR52B4Q8NGK2 314 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 THAP6Q8TBB0 222 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 SPHK1Q9NYA1 384 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 VPS29Q9UBQ0 182 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 KHDRBS3O75525 346 aaKnown RBP12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 ACAA1P09110 424 aaPredicted RBP12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 BMP8BP34820 402 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 ILKQ13418 452 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 BEX5Q5H9J7 111 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 UBE2R2Q712K3 238 aaPredicted RBP12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 BMP8AQ7Z5Y6 402 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 SERPINA12Q8IW75 414 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 PXT1Q8NFP0 134 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 OR1M1Q8NGA1 313 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 WDR77Q9BQA1 342 aaPredicted RBP12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 ORAI3Q9BRQ5 295 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 ZNF408Q9H9D4 720 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 ANGPT4Q9Y264 503 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 AP1M2Q9Y6Q5 423 aa12.89□□□□□ -0.35
PCDHB5-201ENST00000231134 A0A1B0GW55 424 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 TUBAL3A6NHL2 446 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 AGAP14A8MT82 685 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 G3V3Q6 166 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 ABCD4O14678 606 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 FFAR1O14842 300 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SELENOFO60613 162 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 LY86O95711 162 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 DUX4L2P0CJ85 424 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 DUX4L3P0CJ86 424 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 DUX4L4P0CJ87 422 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 DUX4L5P0CJ88 424 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 DUX4L6P0CJ89 424 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 DUX4L7P0CJ90 424 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 DGKGP49619 791 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SERINC3Q13530 473 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 C9orf152Q5JTZ5 239 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 IER5LQ5T953 404 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SERPINA13PQ6UXR4 307 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 BTN2A1Q7KYR7 527 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 OLIG3Q7RTU3 272 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 TSPAN33Q86UF1 283 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 PLA2G15Q8NCC3 412 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 KLHDC9Q8NEP7 349 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 BBS10Q8TAM1 723 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 INTS12Q96CB8 462 aaKnown RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 DUX4Q9UBX2 424 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 CORO2BQ9UQ03 480 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 STK25O00506 426 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 NARSO43776 548 aaKnown RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SOX30O94993 753 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 THP07101 528 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 LIMS3P0CW19 117 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 LIMS4P0CW20 117 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 RNF224P0DH78 156 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 IRF1P10914 325 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 DPEP1P16444 411 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 ACHEP22303 614 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 PPIBP23284 216 aaKnown RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SLC1A3P43003 542 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 GIPRP48546 466 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 RPS24P62847 133 aaKnown RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SMCO1Q147U7 214 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 ATXN7L3Q14CW9 347 aaPredicted RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SLC25A35Q3KQZ1 300 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 C5orf46Q6UWT4 87 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 HSD17B13Q7Z5P4 300 aaPredicted RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SCD5Q86SK9 330 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 MVB12BQ9H7P6 319 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 TDP1Q9NUW8 608 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 ASIC5Q9NY37 505 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 PTCH2Q9Y6C5 1203 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 COL11A1P12107 1806 aaPredicted RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SEMA7AO75326 666 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 RECKO95980 971 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 HOXC13P31276 330 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SEC61A1P61619 476 aaKnown RBP12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SLC36A2Q495M3 483 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 LRRC73Q5JTD7 316 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 OAFQ86UD1 273 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SPAG16Q8N0X2 631 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 KAT2AQ92830 837 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 FOXJ1Q92949 421 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 ELP4Q96EB1 424 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 SPSB2Q99619 263 aa12.88□□□□□ -0.35
PCDHB5-201ENST00000231134 OR6C68A6NDL8 312 aa12.87□□□□□ -0.35
PCDHB5-201ENST00000231134 PTAFRP25105 342 aa12.87□□□□□ -0.35
PCDHB5-201ENST00000231134 SP140Q13342 867 aa12.87□□□□□ -0.35
PCDHB5-201ENST00000231134 GUCA2BQ16661 112 aa12.87□□□□□ -0.35
PCDHB5-201ENST00000231134 C21orf62-AS1Q17RA5 79 aa12.87□□□□□ -0.35
PCDHB5-201ENST00000231134 CCDC157Q569K6 752 aa12.87□□□□□ -0.35
PCDHB5-201ENST00000231134 AFMIDQ63HM1 303 aa12.87□□□□□ -0.35
PCDHB5-201ENST00000231134 LNX2Q8N448 690 aa12.87□□□□□ -0.35
PCDHB5-201ENST00000231134 OR51G2Q8NGK0 314 aa12.87□□□□□ -0.35
PCDHB5-201ENST00000231134 CPNE2Q96FN4 548 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms