RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 HERVK_113Q902F9 699 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 TMEM19Q96HH6 336 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 ASB6Q9NWX5 421 aa16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 CXXC1Q9P0U4 656 aaPredicted RBP16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 PPIEQ9UNP9 301 aaKnown RBP16.64■□□□□ 0.25
CDKN1B-201ENST00000228872 HRO43593 1189 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 STC2O76061 302 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 SLC6A11P48066 632 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 TPMTP51580 245 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 LSM11P83369 360 aaKnown RBP eCLIP16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 PLD1Q13393 1074 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 PIN1Q13526 163 aaPredicted RBP16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 NDUFA9Q16795 377 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 SLC36A2Q495M3 483 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 HSD17B12Q53GQ0 312 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 EOGTQ5NDL2 527 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 PLEKHS1Q5SXH7 462 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 TNFAIP8L2Q6P589 184 aaPredicted RBP16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 TFAP2EQ6VUC0 442 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 FTMTQ8N4E7 242 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 PHOSPHO2Q8TCD6 241 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 C16orf78Q8WTQ4 265 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 ADAMTS14Q8WXS8 1223 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 AUTS2Q8WXX7 1259 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 ERMAPQ96PL5 475 aaPredicted RBP16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 PLA2G12AQ9BZM1 189 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 SAP130Q9H0E3 1048 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 A4GNTQ9UNA3 340 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 IGLV3-16A0A075B6K0 115 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 NPIPB15A6NHN6 443 aaPredicted RBP16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 GIFP27352 417 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 MMP12P39900 470 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 STK11Q15831 433 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 RFLNAQ6ZTI6 216 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 OAFQ86UD1 273 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 BEST4Q8NFU0 473 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 OR4K5Q8NGD3 323 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 WDR48Q8TAF3 677 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 PLD4Q96BZ4 506 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 SECISBP2Q96T21 854 aaKnown RBP16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 MS4A7Q9GZW8 240 aaPredicted RBP16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 CXorf36Q9H7Y0 433 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 HCN3Q9P1Z3 774 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 ZFR2Q9UPR6 939 aaKnown RBP16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 FAM170BA6NMN3 283 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 UQCRC2P22695 453 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 ZP1P60852 638 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 TAF12Q16514 161 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 SHEQ5VZ18 495 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 HBMQ6B0K9 141 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 FAM71E1Q6IPT2 247 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 AGTRAPQ6RW13 159 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 LINC00518Q8N0U6 118 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 SAMD12Q8N8I0 201 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 OR2T35Q8NGX2 323 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 GIMAP1Q8WWP7 306 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 DACT3Q96B18 629 aaPredicted RBP16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 SGTBQ96EQ0 304 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 ZNF354BQ96LW1 612 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 ABHD1Q96SE0 405 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 A4GALTQ9NPC4 353 aa16.63■□□□□ 0.25
CDKN1B-201ENST00000228872 CCDC88CQ9P219 2028 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 DENND4CQ5VZ89 1909 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 ARHGEF33A8MVX0 844 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 SAP18O00422 153 aaKnown RBP16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 TOXO94900 526 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 LCN1P31025 176 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 ACSL1P33121 698 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 RPL3P39023 403 aaKnown RBP16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 KCNJ5P48544 419 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 ZNF791Q3KP31 576 aaPredicted RBP16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 NHLRC3Q5JS37 347 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 HACD4Q5VWC8 232 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 CRTC1Q6UUV9 634 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 KANSL1Q7Z3B3 1105 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 TECPR1Q7Z6L1 1165 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 IQCHQ86VS3 1027 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 RASGRP3Q8IV61 690 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 C7orf61Q8IZ16 206 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 ZNF687Q8N1G0 1237 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 PTP4A1Q93096 173 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 BRD9Q9H8M2 597 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 INSL5Q9Y5Q6 135 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 NPTNQ9Y639 398 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 KDM4EB2RXH2 506 aaPredicted RBP16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 SSNA1O43805 119 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 KLHL18O94889 574 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 SOX30O94993 753 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 PEPDP12955 493 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 MTNR1BP49286 362 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 TAS2R50P59544 299 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 ADGRF1Q5T601 910 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 WASH2PQ6VEQ5 465 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 OVCH2Q7RTZ1 564 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 FGD2Q7Z6J4 655 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 OR4F15Q8NGB8 312 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 SPRYD4Q8WW59 207 aaPredicted RBP16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 WBP2Q969T9 261 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 CACNG6Q9BXT2 260 aa16.62■□□□□ 0.25
CDKN1B-201ENST00000228872 EGLN3Q9H6Z9 239 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms