RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 HNRNPCL2B2RXH8 293 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 HNRNPCL3B7ZW38 293 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 CASC3O15234 703 aaKnown RBP16.21■□□□□ 0.19
USB1-201ENST00000219281 POU2F2P09086 479 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 HNRNPCL4P0DMR1 293 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 SLC1A3P43003 542 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 MAP2K3P46734 347 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 CDH11P55287 796 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 TSPAN31Q12999 210 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 ZNF311Q5JNZ3 666 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 SNAP47Q5SQN1 464 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 CD200R1LQ6Q8B3 271 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 PLET1Q6UQ28 207 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 TMEM107Q6UX40 140 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 VRK2Q86Y07 508 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 ZG16BQ96DA0 208 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 ATF6BQ99941 703 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 PRRG3Q9BZD7 231 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 PPP1R3EQ9H7J1 279 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 RMI1Q9H9A7 625 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 MAU2Q9Y6X3 613 aa16.21■□□□□ 0.19
USB1-201ENST00000219281 IGKV1-8A0A0C4DH67 115 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 A0A1W2PS29 197 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 CLEC3AO75596 197 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 PSKH1P11801 424 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 IFNGR2P38484 337 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 IL18Q14116 193 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 GNA13Q14344 377 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 INSL4Q14641 139 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 SLC30A6Q6NXT4 461 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 MARCH9Q86YJ5 346 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 DNAJC5GQ8N7S2 189 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 ZNF485Q8NCK3 441 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 NLGN4YQ8NFZ3 816 aaPredicted RBP16.2■□□□□ 0.18
USB1-201ENST00000219281 FERD3LQ96RJ6 166 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 SLA2Q9H6Q3 261 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 ZDHHC4Q9NPG8 344 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 OR6C70A6NIJ9 312 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 C4orf51C9J302 202 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 HCN1O60741 890 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 ADH1CP00326 375 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 GNSP15586 552 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 CPN2P22792 545 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 HLA-DMAP28067 261 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 COL9A2Q14055 689 aaPredicted RBP16.2■□□□□ 0.18
USB1-201ENST00000219281 ELAVL3Q14576 367 aaKnown RBP16.2■□□□□ 0.18
USB1-201ENST00000219281 SLC9A5Q14940 896 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 TATDN3Q17R31 274 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 KIAA1161Q6NSJ0 714 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 RASSF6Q6ZTQ3 369 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 RRM2BQ7LG56 351 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 OR8K5Q8NH50 307 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 SOSTQ9BQB4 213 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 TRMT61BQ9BVS5 477 aaKnown RBP16.2■□□□□ 0.18
USB1-201ENST00000219281 PITHD1Q9GZP4 211 aaPredicted RBP16.2■□□□□ 0.18
USB1-201ENST00000219281 CERS4Q9HA82 394 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 B3GAT2Q9NPZ5 323 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 SLC13A4Q9UKG4 626 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 ATG4BQ9Y4P1 393 aa16.2■□□□□ 0.18
USB1-201ENST00000219281 A0A1W2PR48 441 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 SHISA3A0PJX4 238 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 SLC35G4P0C7Q5 338 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 ACP5P13686 325 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 CELP19835 753 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 TRHRP34981 398 aaPredicted RBP16.19■□□□□ 0.18
USB1-201ENST00000219281 TRIM23P36406 574 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 OMPP47874 163 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 ANXA11P50995 505 aaKnown RBP16.19■□□□□ 0.18
USB1-201ENST00000219281 CDK3Q00526 305 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 CHRNEQ04844 493 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 GPM6BQ13491 265 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 TRAM2Q15035 370 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 ZNF791Q3KP31 576 aaPredicted RBP16.19■□□□□ 0.18
USB1-201ENST00000219281 YIF1BQ5BJH7 314 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 PIP5KL1Q5T9C9 394 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 ADAMTSL4Q6UY14 1074 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 TMEM64Q6YI46 380 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 ARIH2OSQ8N7S6 290 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 OR4Q3Q8NH05 313 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 CNRIP1Q96F85 164 aaPredicted RBP16.19■□□□□ 0.18
USB1-201ENST00000219281 ASB16Q96NS5 453 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 CAMK1GQ96NX5 476 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 EQTNQ9NQ60 294 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 CLCA3PQ9Y6N3 262 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 SZT2Q5T011 3432 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 ERI3O43414 337 aaKnown RBP16.19■□□□□ 0.18
USB1-201ENST00000219281 HOXB3P14651 431 aaPredicted RBP16.19■□□□□ 0.18
USB1-201ENST00000219281 P2RY2P41231 377 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 AVPR1BP47901 424 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 ZNF155Q12901 538 aaPredicted RBP16.19■□□□□ 0.18
USB1-201ENST00000219281 BHLHB9Q6PI77 547 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 LSRQ86X29 649 aaPredicted RBP16.19■□□□□ 0.18
USB1-201ENST00000219281 YIPF7Q8N8F6 280 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 POGLUT1Q8NBL1 392 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 SENP5Q96HI0 755 aaPredicted RBP16.19■□□□□ 0.18
USB1-201ENST00000219281 OR7D2Q96RA2 312 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 ARHGDIGQ99819 225 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 IL20RAQ9UHF4 553 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 NTNG1Q9Y2I2 539 aa16.19■□□□□ 0.18
USB1-201ENST00000219281 ALG5Q9Y673 324 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms