RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 SLC26A1Q9H2B4 701 aa9.29□□□□□ -0.92
RTCB-201ENST00000216038 SIRT3Q9NTG7 399 aaPredicted RBP9.29□□□□□ -0.92
RTCB-201ENST00000216038 C14orf105Q9NVL8 296 aa9.29□□□□□ -0.92
RTCB-201ENST00000216038 GMPR2Q9P2T1 348 aaKnown RBP9.29□□□□□ -0.92
RTCB-201ENST00000216038 MAN2B2Q9Y2E5 1009 aa9.29□□□□□ -0.92
RTCB-201ENST00000216038 PCDHGA7Q9Y5G6 932 aa9.29□□□□□ -0.92
RTCB-201ENST00000216038 MRPS18BQ9Y676 258 aaKnown RBP9.29□□□□□ -0.92
RTCB-201ENST00000216038 CNTRLQ7Z7A1 2325 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 IGKV3D-11A0A0A0MRZ8 115 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 J3QRK9 145 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 CLOCKO15516 846 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 RAD1O60671 282 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 ALBP02768 609 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 ATP1B1P05026 303 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 SLC35E2P0CK97 266 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 DDX5P17844 614 aaKnown RBP9.28□□□□□ -0.92
RTCB-201ENST00000216038 TNNI3P19429 210 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 SLC7A1P30825 629 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 MSX2P35548 267 aaPredicted RBP9.28□□□□□ -0.92
RTCB-201ENST00000216038 CHI3L1P36222 383 aaPredicted RBP9.28□□□□□ -0.92
RTCB-201ENST00000216038 PSME3P61289 254 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 RPS26P62854 115 aaKnown RBP9.28□□□□□ -0.92
RTCB-201ENST00000216038 CD300CQ08708 224 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 CDC20Q12834 499 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 PMS2P3Q13401 168 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 TP53BP2Q13625 1128 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 PUM1Q14671 1186 aaKnown RBP eCLIP9.28□□□□□ -0.92
RTCB-201ENST00000216038 COQ5Q5HYK3 327 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 MSANTD1Q6ZTZ1 278 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 WDR53Q7Z5U6 358 aaPredicted RBP9.28□□□□□ -0.92
RTCB-201ENST00000216038 C10orf111Q8N326 155 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 ESX1Q8N693 406 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 IL22RA1Q8N6P7 574 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 CHAC2Q8WUX2 184 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 RIT1Q92963 219 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 FKBP10Q96AY3 582 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 ROPN1LQ96C74 230 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 ELP4Q96EB1 424 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 VMP1Q96GC9 406 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 TXNDC15Q96J42 360 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 SLC35A5Q9BS91 424 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 NANOGQ9H9S0 305 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 EQTNQ9NQ60 294 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 ARMC1Q9NVT9 282 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 ADA2Q9NZK5 511 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 VPS4AQ9UN37 437 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 MMACHCQ9Y4U1 282 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 ATMQ13315 3056 aa9.28□□□□□ -0.92
RTCB-201ENST00000216038 RNF103-CHMP3A0A140T963 221 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 LOC101059948A0A1B0GTJ6 334 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 TCRBV16S1A1N1A0A5B0 115 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 BLACEA4D250 179 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 C17orf105B2RV13 164 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 ACOX3O15254 700 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 SCO2O43819 266 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 ALOX12BO75342 701 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 ERN1O75460 977 aaKnown RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 DNAJB5O75953 348 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 UMODP07911 640 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 HOXB9P17482 250 aaPredicted RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 TCN1P20061 433 aaPredicted RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 M6PRP20645 277 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 CD247P20963 164 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 SLC6A2P23975 617 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 DLSTP36957 453 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 STAT5AP42229 794 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 CCT3P49368 545 aaKnown RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 SLC7A2P52569 658 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 IGLV3-21P80748 117 aaPredicted RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 MS4A2Q01362 244 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 CEACAM7Q14002 265 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 TRIM25Q14258 630 aaKnown RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 ZNF267Q14586 743 aaPredicted RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 PRICKLE4Q2TBC4 344 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 LRIF1Q5T3J3 769 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 ZBTB49Q6ZSB9 765 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 SAMD14Q8IZD0 417 aaPredicted RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 ZNF786Q8N393 782 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 TMCO5AQ8N6Q1 288 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 ZNF321PQ8N8H1 164 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 FAM156AQ8NDB6 213 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 OR13F1Q8NGS4 319 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 GOT1L1Q8NHS2 421 aaPredicted RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 FBXO30Q8TB52 745 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 PTPMT1Q8WUK0 201 aaPredicted RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 METTL21AQ8WXB1 218 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 NKD1Q969G9 470 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 FAM120BQ96EK7 910 aaKnown RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 ZNF486Q96H40 463 aaPredicted RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 SH3YL1Q96HL8 342 aaPredicted RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 YIPF4Q9BSR8 244 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 THUMPD3Q9BV44 507 aaKnown RBP9.27□□□□□ -0.92
RTCB-201ENST00000216038 CNPPD1Q9BV87 410 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 NRSN2Q9GZP1 204 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 HOXD1Q9GZZ0 328 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 SP140LQ9H930 580 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 WDR54Q9H977 334 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 SIAEQ9HAT2 523 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 NEUROD4Q9HD90 331 aa9.27□□□□□ -0.92
RTCB-201ENST00000216038 ZCCHC3Q9NUD5 404 aaKnown RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms