RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SLITRK4Q8IW52 837 aa18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 OR4D11Q8NGI4 311 aa18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 TMEFF2Q9UIK5 374 aaPredicted RBP18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PCDHGA8Q9Y5G5 932 aa18.33■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FAM86C2PA6NEL3 165 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 D6RAR5 112 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SEMA7AO75326 666 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 EPPINO95925 133 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FBLP22087 321 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GRK6P43250 576 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 HPCAP84074 193 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RHBDD2Q6NTF9 364 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 DBX2Q6ZNG2 339 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 KCTD8Q6ZWB6 473 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ZNF605Q86T29 641 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CLVS1Q8IUQ0 354 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 HOXB13Q92826 284 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RNF31Q96EP0 1072 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PTCHD1Q96NR3 888 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 STACQ99469 402 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SIDT1Q9NXL6 827 aaKnown RBP18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PDP1Q9P0J1 537 aaPredicted RBP18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SRPK3Q9UPE1 567 aa18.32■□□□□ 0.52
TNFRSF1A-201ENST00000162749 NTN3O00634 580 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 HS6ST1O60243 411 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 COQ9O75208 318 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ALOX5P09917 674 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RHCEP18577 417 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SSTR4P31391 388 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SERTAD2Q14140 314 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 OTOGLQ3ZCN5 2332 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ERI1Q8IV48 349 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PIK3R3Q92569 461 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ISOC1Q96CN7 298 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SDF2Q99470 211 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PIP5K1AQ99755 562 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 POLR1BQ9H9Y6 1135 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 MKLN1Q9UL63 735 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 MMACHCQ9Y4U1 282 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 COL27A1Q8IZC6 1860 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 TIAF1O95411 115 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FUT4P22083 530 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 EMDP50402 254 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 EFNA3P52797 238 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CDH12P55289 794 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SPIBQ01892 262 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 EPS8Q12929 822 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GANABQ14697 944 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RAB39AQ14964 217 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CLPPQ16740 277 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 MINDY4Q4G0A6 757 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 VWA2Q5GFL6 755 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CCNJQ5T5M9 372 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ARHGAP40Q5TG30 622 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 TYW3Q6IPR3 259 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 TCTN3Q6NUS6 607 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CYP4Z1Q86W10 505 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 RBM45Q8IUH3 476 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 LACC1Q8IV20 430 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 C8orf59Q8N0T1 100 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 VANGL1Q8TAA9 524 aaPredicted RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SATB2Q9UPW6 733 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FAM32AQ9Y421 112 aaKnown RBP18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 WDR45Q9Y484 360 aa18.31■□□□□ 0.52
TNFRSF1A-201ENST00000162749 A0A1B0GVG6 124 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 TNFRSF11BO00300 401 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 FFAR1O14842 300 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 IFNA16P05015 189 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 IL7RP16871 459 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PSG6Q00889 435 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ZNF155Q12901 538 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ZNF267Q14586 743 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PHF19Q5T6S3 580 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 QSOX2Q6ZRP7 698 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 COX18Q8N8Q8 333 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 SLC38A9Q8NBW4 561 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CHDHQ8NE62 594 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 OR52J3Q8NH60 311 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GPR151Q8TDV0 419 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ATOH1Q92858 354 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CNDP2Q96KP4 475 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 PINK1Q9BXM7 581 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ZNF350Q9GZX5 532 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ING2Q9H160 280 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 KCND3Q9UK17 655 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 HEMK1Q9Y5R4 338 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 EP300Q09472 2414 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 IGKV3D-11A0A0A0MRZ8 115 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 GALR2O43603 387 aaPredicted RBP18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 LGI1O95970 557 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ALPPP05187 535 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CRHBPP24387 322 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 DAPP51397 102 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 BIKQ13323 160 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 CTU2Q2VPK5 515 aaKnown RBP18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ZNF311Q5JNZ3 666 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 DCST2Q5T1A1 773 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 MFSD4BQ5TF39 518 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 KDM4DQ6B0I6 523 aa18.3■□□□□ 0.52
TNFRSF1A-201ENST00000162749 LAIR2Q6ISS4 152 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms