RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 OR9A4Q8NGU2 314 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 SLC22A18Q96BI1 424 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 CD180Q99467 661 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 DSN1Q9H410 356 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 MAGIXQ9H6Y5 334 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 CALML5Q9NZT1 146 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 DHCR7Q9UBM7 475 aaKnown RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 H0YC42 278 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PRDX1Q06830 199 aaKnown RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 ELOCQ15369 112 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 LRIT3Q3SXY7 679 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 FLYWCH1Q4VC44 716 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 KLHL22Q53GT1 634 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PLBD1Q6P4A8 553 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 MAFAQ8NHW3 353 aaPredicted RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 SLC38A5Q8WUX1 472 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 TESCQ96BS2 214 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 MAP3K3Q99759 626 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 TREX2Q9BQ50 279 aaPredicted RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 TTYH2Q9BSA4 534 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 OBP2AQ9NY56 170 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 ATXN7L1Q9ULK2 861 aaPredicted RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 CHD5Q8TDI0 1954 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 RALGAPA2Q2PPJ7 1873 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 GFRA2O00451 464 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 GASTP01350 101 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 C7P10643 843 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 SRFP11831 508 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PYCR1P32322 319 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 SDC2P34741 201 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 HSD17B2P37059 387 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 GUCA1AP43080 201 aaPredicted RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 RABIFP47224 123 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 RBBP4Q09028 425 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 CCBE1Q6UXH8 406 aaPredicted RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 CAMKVQ8NCB2 501 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 TM9SF2Q99805 663 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 DPH1Q9BZG8 443 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 SLITRK2Q9H156 845 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 EGLN3Q9H6Z9 239 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 CDC14CA4D256 554 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PRAMEF4O60810 478 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 JRKO75564 520 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 APBB3O95704 486 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PTHP01270 115 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 SLC2A2P11168 524 aaPredicted RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 NDUFS1P28331 727 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 EIF1AXP47813 144 aaKnown RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 CLK3P49761 638 aaKnown RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 DBPQ10586 325 aaPredicted RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 TRAM2Q15035 370 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PROX2Q3B8N5 592 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PRAMEF9Q5VWM5 478 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 JAZF1Q86VZ6 243 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PTRH1Q86Y79 214 aaKnown RBP11.35□□□□□ -0.59
CHPF2-201ENST00000035307 C10orf111Q8N326 155 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 AMER3Q8N944 861 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 UCN3Q969E3 161 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 PTCHD1Q96NR3 888 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 OR5M11Q96RB7 305 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 RAB11FIP5Q9BXF6 653 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 SP140LQ9H930 580 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 ACOT13Q9NPJ3 140 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 SLC2A4RGQ9NR83 387 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 LRIT1Q9P2V4 623 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 MGAT4BQ9UQ53 548 aa11.35□□□□□ -0.59
CHPF2-201ENST00000035307 TRAV6A0A075B6T7 132 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 A0A1W2PQF6 199 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 SAGE2PA6NJ88 616 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 C2orf74A8MZ97 194 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 C11orf98E9PRG8 122 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 GFYI3L273 518 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 COQ9O75208 318 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 PROS1P07225 676 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 DCDC1P59894 354 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 SMAD4Q13485 552 aaKnown RBP11.34□□□□□ -0.59
CHPF2-201ENST00000035307 KIAA0895LQ68EN5 471 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 FRMPD2BQ6IN97 320 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 GKN2Q86XP6 184 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 L3MBTL4Q8NA19 623 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 PAPD5Q8NDF8 572 aaKnown RBP11.34□□□□□ -0.59
CHPF2-201ENST00000035307 OR56A1Q8NGH5 318 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 ZNF354BQ96LW1 612 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 C1QTNF2Q9BXJ5 285 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 FTSJ1Q9UET6 329 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 SOX1O00570 391 aaPredicted RBP11.34□□□□□ -0.59
CHPF2-201ENST00000035307 FUCA1P04066 466 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 CSN2P05814 226 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 DDCP20711 480 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 CHRNEQ04844 493 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 SMAD2Q15796 467 aaKnown RBP11.34□□□□□ -0.59
CHPF2-201ENST00000035307 UNC5DQ6UXZ4 953 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 KLHL36Q8N4N3 616 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 SAMD8Q96LT4 415 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 MND1Q9BWT6 205 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 MVB12BQ9H7P6 319 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 MRPL15Q9P015 296 aaKnown RBP11.34□□□□□ -0.59
CHPF2-201ENST00000035307 PROM1O43490 865 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 PCGF2P35227 344 aa11.34□□□□□ -0.59
CHPF2-201ENST00000035307 E2F2Q14209 437 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms