RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ECI2O75521 394 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ZMPSTE24O75844 475 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 BCHEP06276 602 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 RPS17P08708 135 aaKnown RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ITGB5P18084 799 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TIA1P31483 386 aaKnown RBP eCLIP5.79□□□□□ -1.481e-6■■■□□ 15.6
VPS13D-201ENST00000011700 CLDN8P56748 225 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 CSNK2A1P68400 391 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 DCST2Q5T1A1 773 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 PRSS55Q6UWB4 352 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ANKRD46Q86W74 232 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 C12orf29Q8N999 325 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 NELL2Q99435 816 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 MGLLQ99685 303 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 STMND1H3BQB6 276 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 RNASET2O00584 256 aaKnown RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 F10P00742 488 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 GLB1P16278 677 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 UGT2B7P16662 529 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 POU3F3P20264 500 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TEKQ02763 1124 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ILDR1Q86SU0 546 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF619Q8N2I2 560 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 OR2T11Q8NH01 316 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 GPR148Q8TDV2 347 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ASB12Q8WXK4 309 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 MIR1-1HGQ9H1L0 117 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 LHX6Q9UPM6 363 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 A8MT66 165 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 YKT6O15498 198 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 CRYZL1O95825 349 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 GABRA5P31644 462 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TNFAIP8L2Q6P589 184 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 MRPL10Q7Z7H8 261 aaKnown RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 SUMF2Q8NBJ7 301 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 OR7G1Q8NGA0 311 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF689Q96CS4 500 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 L3HYPDHQ96EM0 354 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 HMCESQ96FZ2 354 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 EXTL2Q9UBQ6 330 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 SRPK3Q9UPE1 567 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 CPQQ9Y646 472 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 RALGAPA2Q2PPJ7 1873 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 AGRPO00253 132 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF623O75123 536 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 USP2O75604 605 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 RGS11O94810 467 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 SUB1P53999 127 aaKnown RBP eCLIP5.79□□□□□ -1.481e-6■■□□□ 12.7
VPS13D-201ENST00000011700 SLAMF1Q13291 335 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 GINS1Q14691 196 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TSTQ16762 297 aaKnown RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TMEM41BQ5BJD5 291 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 YOD1Q5VVQ6 348 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 SULF2Q8IWU5 870 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 CANT1Q8WVQ1 401 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 RBMXL1Q96E39 390 aaKnown RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 FBXL18Q96ME1 805 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 DUSP23Q9BVJ7 150 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 CHRNA9Q9UGM1 479 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ZSCAN5BA6NJL1 495 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF850A8MQ14 1090 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 OIP5O43482 229 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 IFI30P13284 250 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 RAB4AP20338 218 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 NXPE4Q6UWF7 544 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 DPY19L4Q7Z388 723 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TSTD1Q8NFU3 115 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 C7orf43Q8WVR3 580 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 MED30Q96HR3 178 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TSSK6Q9BXA6 273 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 PDZD7Q9H5P4 517 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 PARPBPQ9NWS1 579 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 B3GAT1Q9P2W7 334 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 PLXNB2O15031 1838 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 QSER1Q2KHR3 1735 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 NSG1A0A0A6YYJ2 146 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 HTRA2O43464 458 aaPredicted RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 KDELR3O43731 214 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 RAB3BP20337 219 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 BDKRB2P30411 391 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ALDH3B1P43353 468 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 PLA2G16P53816 162 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TAS2R39P59534 338 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ZNF805Q5CZA5 627 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 NANOGP8Q6NSW7 305 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 UCN3Q969E3 161 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ISG20Q96AZ6 181 aaKnown RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 PRRX2Q99811 253 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ZPBPQ9BS86 351 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 ANKRD19PQ9H560 264 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 NANOGQ9H9S0 305 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 WDR6Q9NNW5 1121 aaKnown RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 KLK4Q9Y5K2 254 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 DYSFO75923 2080 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 BOLA2-SMG1P6H3BVE0 249 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 TGFB1I1O43294 461 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 LCMT2O60294 686 aaKnown RBP5.79□□□□□ -1.48
VPS13D-201ENST00000011700 BMP1P13497 986 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 DTYMKP23919 212 aa5.79□□□□□ -1.48
VPS13D-201ENST00000011700 EPHA4P54764 986 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms