RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Vmn1r76F8VQ63 324 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Pbx2O35984 430 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hbb-bh1P04444 147 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 PlatP11214 559 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Kcnn3P58391 732 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Macrod2Q3UYG8 475 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Nfatc2Q60591 927 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rab39aQ8BHD0 217 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc35f4Q8BZK4 485 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cables2Q8K3M5 476 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Trib2Q8K4K3 343 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1325Q8VF43 315 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sohlh2Q9D489 467 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Eif4e3Q9DBB5 207 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hsd3b7Q9EQC1 369 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Scnn1gQ9WU39 655 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm8225D3Z536 292 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vwa2Q70UZ7 791 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tas2r120Q7M721 295 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1161Q7TR29 321 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Wipi2Q80W47 445 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 GldnQ8BMF8 549 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gsg1Q8R1W2 324 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Nt5c1bQ91YE9 573 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hes5P70120 167 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gal3st4Q3V1B8 480 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr305Q7TS02 319 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vash1Q8C1W1 375 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn1r185Q8R299 319 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tmprss11dQ8VHK8 417 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fam69aQ9D6I7 428 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Smchd1Q6P5D8 2007 aaKnown RBP11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr773F6VS78 311 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm42421F6X8D5 166 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Syt3O35681 587 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rps15aP62245 130 aaKnown RBP11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ebf1Q07802 591 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc27a5Q4LDG0 689 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Supv3l1Q80YD1 779 aaKnown RBP11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 GrpQ8R1I2 146 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr772Q8VGC5 311 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Imp4Q8VHZ7 291 aaKnown RBP11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rnh1Q91VI7 456 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Xrn2Q9DBR1 951 aaKnown RBP11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zfp599E9PWP1 548 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Adam3F8VQ03 822 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fpr-s1O08790 351 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ech1O35459 327 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 AregP31955 248 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm5127Q3UQH6 212 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Dyrk1aQ61214 763 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Dcun1d4Q8CCA0 292 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gas2l1Q8JZP9 678 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc45a3Q8K0H7 553 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr850Q8VFF2 315 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Wdr45Q91VM3 360 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ndufb10Q9DCS9 176 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 GltpQ9JL62 209 aa11.4□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm4858A0A0A6YWS7 318 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Galnt9G3X942 604 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 AbatP61922 500 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc9a3r1P70441 355 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Crtc2Q3U182 692 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dcdc2Q5DU00 475 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr347Q8VGK2 312 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1257Q8VGP0 309 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Wdr45bQ9CR39 344 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Aaed1Q9D1A0 226 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fezf2Q9ESP5 455 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pard6gQ9JK84 382 aa11.4□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ino80eA0A0U1RP99 260 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Upp1P52624 311 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ankrd28Q505D1 1053 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gpr75Q6X632 540 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Arhgef4Q7TNR9 484 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc24a4Q8CGQ8 622 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Q8R3Y5 413 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dhcr24Q8VCH6 516 aaKnown RBP11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dnajb11Q99KV1 358 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Q9CPZ3 230 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr716Q9EPG6 314 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Scgb2b3D2XZ38 112 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Coq10aE9Q3H6 259 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cyp8b1O88962 500 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Stt3aP46978 705 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mal2Q8BI08 175 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ankmy1Q8C0W1 906 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Lap3Q9CPY7 519 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pmepa1Q9D7R2 260 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Phlpp1Q8CHE4 1687 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tiam2Q6ZPF3 1715 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 IghaA0A0A6YXW6 389 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zfp808B8JJZ4 753 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 MpoP11247 718 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc12a3P59158 1002 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fbxo7Q3U7U3 523 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 PcgF3Q8BTQ0 241 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Arrb1Q8BWG8 418 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr202Q8VGQ3 307 aa11.39□□□□□ -0.59
Trim56-201ENSMUST00000054384 Polr2cP97760 275 aa11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms