RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ccr3P51678 359 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gnb5P62881 395 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Mup20Q5FW60 181 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Xkr9Q5GH62 373 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Mep1bQ61847 704 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Tas2r117Q7M715 330 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cst13Q80ZN5 141 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Slc35f1Q8BGK5 408 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Art3Q8R2G4 371 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Vmn1r51Q8VIC6 319 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 5430402E10RikQ9D3N5 173 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Emc7Q9EP72 241 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gpr88Q9EPB7 384 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ntn4Q9JI33 628 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Dll4Q9JI71 686 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Phc2Q9QWH1 850 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Eif4hQ9WUK2 248 aaKnown RBP15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 A0A1W2P799 418 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 LipcP27656 510 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Etv1P41164 477 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Adra2aQ01338 450 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cdkn2dQ60773 166 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Nup214Q80U93 2085 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfm2Q8BM13 448 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 FgbQ8K0E8 481 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Vmn1r206Q8R277 312 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfr54Q8VFE6 313 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Etv5Q9CXC9 510 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Spata19Q9DAQ9 154 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Sdccag3A2AIW0 432 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Mup18A2BIM8 181 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Skint2A7XUX6 400 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 P01648 108 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Mup11P04938 181 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 TyrP11344 533 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Lman2lP59481 347 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 TigitP86176 249 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Nt5c3bQ3UFY7 300 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm21320Q4FZE8 181 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Coq8aQ60936 645 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfr591Q7TRR7 314 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Fam205cQ80YD3 371 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 TtpaQ8BWP5 278 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gprin3Q8BWS5 763 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 D2hgdhQ8CIM3 535 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Hus1bQ8K572 276 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cd276Q8VE98 316 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Eral1Q9CZU4 437 aaKnown RBP15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 ItgaxQ9QXH4 1169 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ppm1dQ9QZ67 598 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Acox1Q9R0H0 661 aaKnown RBP15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Nlrc5C3VPR6 1915 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cfap46E9Q2C0 2641 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 4930433I11RikA0A0U1RPT6 723 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Vmn2r9K7N6Z8 848 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Btg4O70552 250 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Plin2P43883 425 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Scrn3Q3TMH2 418 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Zrsr1Q64707 428 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Hist2h2aa1Q6GSS7 130 aaKnown RBP15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cox14Q8BH51 57 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Zcchc3Q8BPK2 400 aaKnown RBP15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Crispld1Q8CGD2 500 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Noxo1Q8VCM2 349 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfr1467Q8VFW1 308 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 EqtnQ9D9V2 337 aa15.32■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm13283A0A087WPG5 182 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 2610021A01RikE9Q0Q3 834 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 CremP27699 357 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Tas2r7P59530 312 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Serpina7P61939 418 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Mrpl10Q3TBW2 262 aaKnown RBP15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Vwa5b2Q3UR50 1248 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Runx3Q64131 409 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Npsr1Q8BZP8 371 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ska3Q8C263 411 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 SdslQ8R238 329 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Slc9a8Q8R4D1 576 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Idh3bQ91VA7 384 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Fam174aQ9D3L0 190 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ssr3Q9DCF9 185 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Rp1P56716 2095 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Dmrtb1A2A9I7 359 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm14459A2BI73 179 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Rpl6P47911 296 aaKnown RBP15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 RabggtbP53612 339 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 BC030870Q3V2G4 71 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Pnliprp1Q5BKQ4 473 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Bpifb1Q61114 474 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Tas2r3Q7TQA7 316 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfr744Q7TRM0 323 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Nmral1Q8K2T1 309 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Vmn1r87Q8R255 295 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cxxc5Q91WA4 317 aaKnown RBP15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfr459Q924H8 314 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gimap3Q99MI6 301 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Glipr1Q9CWG1 255 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Dnmt3lQ9CWR8 421 aaKnown RBP15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Uba2Q9Z1F9 638 aa15.31■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cnih2O35089 160 aa15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms