RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PDX1P52945 283 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 CRISP3P54108 245 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 FUT5Q11128 374 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 LY6DQ14210 128 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 MINDY4Q4G0A6 757 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.21□□□□□ -0.456e-6■■■■□ 21.1
PHGDH-221ENST00000641573 GPAT3Q53EU6 434 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 SFT2D3Q587I9 215 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 EXOSC6Q5RKV6 272 aaKnown RBP12.21□□□□□ -0.45
PHGDH-221ENST00000641573 ATAD3BQ5T9A4 648 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 MFSD4BQ5TF39 518 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 ZCCHC12Q6PEW1 402 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 RBM44Q6ZP01 1051 aaKnown RBP12.21□□□□□ -0.45
PHGDH-221ENST00000641573 QSOX2Q6ZRP7 698 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 COX15Q7KZN9 410 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 WDR53Q7Z5U6 358 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-221ENST00000641573 ZDHHC21Q8IVQ6 265 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 CACTIN-AS1Q8N1I8 211 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 VWA5B2Q8N398 1253 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 BMPERQ8N8U9 685 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 OR52R1Q8NGF1 315 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 BBS10Q8TAM1 723 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 LZICQ8WZA0 190 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 SLC9A6Q92581 669 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 EME1Q96AY2 570 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 CLIP3Q96DZ5 547 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 NAF1Q96HR8 494 aaKnown RBP12.21□□□□□ -0.45
PHGDH-221ENST00000641573 ZNF607Q96SK3 696 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 CTRCQ99895 268 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 BDH2Q9BUT1 245 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 COQ10BQ9H8M1 238 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 BCL2L10Q9HD36 194 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 APMAPQ9HDC9 416 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 EXD2Q9NVH0 621 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 GIN1Q9NXP7 522 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 DNAJB9Q9UBS3 223 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 ZNF639Q9UID6 485 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 LIPT1Q9Y234 373 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 LRRC42Q9Y546 428 aa12.21□□□□□ -0.45
PHGDH-221ENST00000641573 A0A0G2JPF8 293 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 HNRNPCL2B2RXH8 293 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 HNRNPCL3B7ZW38 293 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 AGR2O95994 175 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 CST1P01037 141 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 FABP3P05413 133 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 CHRM4P08173 479 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 ALOX5P09917 674 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 HNRNPCL4P0DMR1 293 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 TNNI3P19429 210 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 S1PR1P21453 382 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 GALNSP34059 522 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 KCNJ10P78508 379 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 E2F1Q01094 437 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 MC2RQ01718 297 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 RHAGQ02094 409 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 DUSP8Q13202 625 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 ZNF267Q14586 743 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-221ENST00000641573 IL11RAQ14626 422 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 DUSP5Q16690 384 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 NKAIN1Q4KMZ8 207 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 IFI44LQ53G44 452 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 VWA2Q5GFL6 755 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 PRAMEF8Q5VWM4 474 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 PRAMEF7Q5VXH5 474 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 OLIG3Q7RTU3 272 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 PRICKLE2Q7Z3G6 844 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 C16orf62Q7Z3J2 963 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 ARMC8Q8IUR7 673 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 CDRT4Q8N9R6 151 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 SLC38A9Q8NBW4 561 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 SLC16A11Q8NCK7 471 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 SPPL2AQ8TCT8 520 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 CDS1Q92903 461 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 TSLPQ969D9 159 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 VPS50Q96JG6 964 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 ZNF184Q99676 751 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-221ENST00000641573 TREX2Q9BQ50 279 aaPredicted RBP12.2□□□□□ -0.46
PHGDH-221ENST00000641573 SEMA4CQ9C0C4 833 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 RUBCNLQ9H714 662 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 NTN4Q9HB63 628 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 CPNE5Q9HCH3 593 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 IL1RAPQ9NPH3 570 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 SLC22A11Q9NSA0 550 aa12.2□□□□□ -0.46
PHGDH-221ENST00000641573 IGKV3D-11A0A0A0MRZ8 115 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 hCG_2039718K7EN88 272 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 HRKO00198 91 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 GNGT2O14610 69 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 POLR1CO15160 346 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 SERPINB7O75635 380 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 PRSS23O95084 383 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 MFN2O95140 757 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 H6PDO95479 791 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 ONECUT2O95948 504 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 CCL4P13236 92 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 CD247P20963 164 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 SSTR4P31391 388 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 CCKBRP32239 447 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 AQP4P55087 323 aa12.19□□□□□ -0.46
PHGDH-221ENST00000641573 DCDP81605 110 aaKnown RBP12.19□□□□□ -0.46
PHGDH-221ENST00000641573 VLDLRP98155 873 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms