RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	PPP1CA	P62136	330 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	TRA2B	P62995	288 aa	Known RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	HOXA4	Q00056	320 aa	Predicted RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	KPNB1	Q14974	876 aa	Known RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	RPS6KA1	Q15418	735 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	FASTKD1	Q53R41	847 aa	Known RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	HECTD2	Q5U5R9	776 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	SPESP1	Q6UW49	350 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	ZNF627	Q7L945	461 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	LRRC6	Q86X45	466 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	SLC13A5	Q86YT5	568 aa	Predicted RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	TMEM139	Q8IV31	216 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	RAB42	Q8N4Z0	105 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	OR52E1	Q8NGJ3	308 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	FAM110D	Q8TAY7	271 aa	Predicted RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	ASZ1	Q8WWH4	475 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	SLC13A3	Q8WWT9	602 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	ELMO1	Q92556	727 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	ANP32B	Q92688	251 aa	Known RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	TUBGCP3	Q96CW5	907 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	INTS14	Q96SY0	518 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	RUFY1	Q96T51	708 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	PAFAH2	Q99487	392 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	RAB11FIP5	Q9BXF6	653 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	CACNG6	Q9BXT2	260 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	TRIM2	Q9C040	744 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	FAM96A	Q9H5X1	160 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	ACTR5	Q9H9F9	607 aa	Predicted RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	FARSA	Q9Y285	508 aa	Known RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	TMED5	Q9Y3A6	229 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	JRKL	Q9Y4A0	524 aa		5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	SIRT4	Q9Y6E7	314 aa	Predicted RBP	5.89	□□□□□ -1.47
CASC19-238	ENST00000641523	ZNF106	Q9H2Y7	1883 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ARPC4-TTLL3	A0A0A6YYG9	625 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	SLC9B1P1	A6NJY1	282 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	C17orf100	A8MU93	164 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	TMEM150C	B9EJG8	249 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	TEX22	C9J3V5	150 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523		E7EQ34	232 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	CCL22	O00626	93 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ADAMDEC1	O15204	470 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ALPP	P05187	535 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	APRT	P07741	180 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	HOXB9	P17482	250 aa	Predicted RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	F8A1	P23610	371 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	GSTM2	P28161	218 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	FOXN2	P32314	431 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	CA5A	P35218	305 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	IDUA	P35475	653 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ARCN1	P48444	511 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	CAPZA1	P52907	286 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	SARNP	P82979	210 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	CDK16	Q00536	496 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	RUNX1T1	Q06455	604 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	OLIG2	Q13516	323 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	IL13RA2	Q14627	380 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	KIR2DS3	Q14952	304 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ZNF658B	Q4V348	819 aa	Predicted RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	AADACL2	Q6P093	401 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	TTC23L	Q6PF05	361 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	MSANTD1	Q6ZTZ1	278 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ASB18	Q6ZVZ8	466 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	MDGA2	Q7Z553	956 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	RAB43	Q86YS6	212 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	PIANP	Q8IYJ0	282 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	DSEL	Q8IZU8	1212 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	CLDN19	Q8N6F1	224 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	TRIM58	Q8NG06	486 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	OR52K1	Q8NGK4	314 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	OR5K2	Q8NHB8	316 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	SLC5A11	Q8WWX8	675 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	CNOT9	Q92600	299 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	REPS1	Q96D71	796 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	KLHL15	Q96M94	604 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	FYTTD1	Q96QD9	318 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	PANX3	Q96QZ0	392 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ZNF747	Q9BV97	191 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	NLN	Q9BYT8	704 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	TRIM4	Q9C037	500 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	IL22	Q9GZX6	179 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	NUAK2	Q9H093	628 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ZNF71	Q9NQZ8	489 aa	Predicted RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	POLE3	Q9NRF9	147 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ZMAT5	Q9UDW3	170 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	FBXL17	Q9UF56	701 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	OSGIN1	Q9UJX0	560 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	ADAM21	Q9UKJ8	722 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	PACSIN2	Q9UNF0	486 aa	Predicted RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	SNX7	Q9UNH6	387 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	TP53TG5	Q9Y2B4	290 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	R3HDM2	Q9Y2K5	976 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	MRPS18B	Q9Y676	258 aa	Known RBP	5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	NFS1	Q9Y697	457 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	DOPEY1	Q5JWR5	2465 aa		5.88	□□□□□ -1.47
CASC19-238	ENST00000641523	BSN	Q9UPA5	3926 aa		5.87	□□□□□ -1.47
CASC19-238	ENST00000641523	PIKFYVE	Q9Y2I7	2098 aa		5.87	□□□□□ -1.47
CASC19-238	ENST00000641523	SPTB	P11277	2137 aa		5.87	□□□□□ -1.47
CASC19-238	ENST00000641523		A0A0G2JPF8	293 aa		5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms