RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 CYP7B1O75881 506 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 SEMA4FO95754 770 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CSTF2P33240 577 aaKnown RBP eCLIP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 GIPRP48546 466 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 PSMD7P51665 324 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CDK5Q00535 292 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 NCF4Q15080 339 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 TSTQ16762 297 aaKnown RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 ZNF404Q494X3 552 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CDC73Q6P1J9 531 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 KIF18BQ86Y91 864 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 SAMD14Q8IZD0 417 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CAMKVQ8NCB2 501 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 SMRP1Q8NCR6 262 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 NR4A3Q92570 626 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CDS1Q92903 461 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 TMEM80Q96HE8 168 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CHCHD6Q9BRQ6 235 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CENPOQ9BU64 300 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 POLDIP3Q9BY77 421 aaKnown RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 MMP27Q9H306 513 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 SEMA4GQ9NTN9 838 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 EVA1BQ9NVM1 165 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 MMP17Q9ULZ9 603 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 LSM2Q9Y333 95 aaKnown RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 MRPS2Q9Y399 296 aaKnown RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 SLC22A7Q9Y694 548 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CPSF4LA6NMK7 179 aaKnown RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 C10orf142B7Z368 130 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 DBTP11182 482 aaKnown RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 GSTM3P21266 225 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 TLX1P31314 330 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 PRKAR1BP31321 381 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 LSSP48449 732 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 PCYT1AP49585 367 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 ZNF91Q05481 1191 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 ACSM5Q6NUN0 579 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 FRRS1Q6ZNA5 592 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 USP53Q70EK8 1073 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 ABHD13Q7L211 337 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 ATCAYQ86WG3 371 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 MEX3DQ86XN8 651 aaKnown RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 SLC22A18ASQ8N1D0 253 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CACTIN-AS1Q8N1I8 211 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 OR2L13Q8N349 312 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CLIP4Q8N3C7 705 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 FAM26EQ8N5C1 309 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 KBTBD8Q8NFY9 601 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 OR52P1PQ8NH57 321 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 GPBAR1Q8TDU6 330 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 SNRNP27Q8WVK2 155 aaKnown RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 ZFPM2Q8WW38 1151 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 DIO2Q92813 273 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 PPP1R14BQ96C90 147 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 NECTIN4Q96NY8 510 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 ZFYVE21Q9BQ24 234 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 TSSK6Q9BXA6 273 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 TCEAL2Q9H3H9 227 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-211ENST00000641213 CPNE7Q9UBL6 633 aa15.98■□□□□ 0.15
PHGDH-211ENST00000641213 H0YGG7 62 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 ARHGAP33O14559 1287 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 DSCR3O14972 297 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 TLX2O43763 284 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-211ENST00000641213 TNFP01375 233 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 CPMP14384 443 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 PVRP15151 417 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 TRHRP34981 398 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-211ENST00000641213 SOX18P35713 384 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 ARF3P61204 181 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-211ENST00000641213 IFITM3Q01628 133 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 RHAGQ02094 409 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 TRAM2Q15035 370 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 SFTPA2Q8IWL1 248 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 TMEFF1Q8IYR6 380 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 FAM3CQ92520 227 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 SLC9A6Q92581 669 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 TAPBPLQ9BX59 468 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 PLA2G12AQ9BZM1 189 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 CLEC2DQ9UHP7 191 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 MKLN1Q9UL63 735 aa15.97■□□□□ 0.15
PHGDH-211ENST00000641213 DNAH14Q0VDD8 3507 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 ZNF860A6NHJ4 632 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 C2orf74A8MZ97 194 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 CCRL2O00421 344 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 IGHV4-34P06331 123 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 ALOX12P18054 663 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 ZNF10P21506 573 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-211ENST00000641213 AVPR1BP47901 424 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 EFNB1P98172 346 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 SSX1Q16384 188 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 SLC25A30Q5SVS4 291 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 PRICKLE2Q7Z3G6 844 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 ABI3BPQ7Z7G0 1075 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 SNX29P2Q8IUI4 249 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 GJD3Q8N144 294 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 SLC44A3Q8N4M1 653 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 FGF11Q92914 225 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 OPALINQ96PE5 141 aa15.96■□□□□ 0.15
PHGDH-211ENST00000641213 NXF2Q9GZY0 626 aaKnown RBP15.96■□□□□ 0.15
PHGDH-211ENST00000641213 PRDM9Q9NQV7 894 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms