RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	TDG	Q13569	410 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	KRT33B	Q14525	404 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	KCNMB1	Q16558	191 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	ZNF239	Q16600	458 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	AKIRIN2	Q53H80	203 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SOWAHC	Q53LP3	525 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	ATPAF1	Q5TC12	328 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	ZNF697	Q5TEC3	545 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	FAM46C	Q5VWP2	391 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	HEPHL1	Q6MZM0	1159 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	ZNF549	Q6P9A3	640 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	FBXO46	Q6PJ61	603 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SLC36A4	Q6YBV0	504 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	LRRC18	Q8N456	261 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	MDGA1	Q8NFP4	955 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	C22orf15	Q8WYQ4	148 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	RHBDF1	Q96CC6	855 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	OTUB2	Q96DC9	234 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	CXorf58	Q96LI9	332 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	GPR78	Q96P69	363 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	GATA5	Q9BWX5	397 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	NT5DC2	Q9H857	520 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SMURF1	Q9HCE7	757 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	CTPS2	Q9NRF8	586 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	ZFP57	Q9NU63	452 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	FAM118A	Q9NWS6	357 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SCN3B	Q9NY72	215 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	MUTYH	Q9UIF7	546 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	IKZF3	Q9UKT9	509 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	RNF6	Q9Y252	685 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	CCL26	Q9Y258	94 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	PADI2	Q9Y2J8	665 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	HCFC2	Q9Y5Z7	792 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SZT2	Q5T011	3432 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	LOC285095	A0A1B0GVY8	99 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	URAD	A6NGE7	173 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	LRRC14B	A6NHZ5	514 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	C1orf196	B1AJZ1	125 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931		M0QZK8	103 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	FOXE1	O00358	373 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	CRCP	O75575	148 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	RD3L	P0DJH9	198 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	UQCRC2	P22695	453 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	CNTF	P26441	200 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	FMO3	P31513	532 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	THBS2	P35442	1172 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	CTSO	P43234	321 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	MAPK9	P45984	424 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	NRIP1	P48552	1158 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SLC11A2	P49281	568 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	NTHL1	P78549	312 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	CSHL1	Q14406	222 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	P2RY14	Q15391	338 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	USP39	Q53GS9	565 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	RNASE10	Q5GAN6	216 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	LCN1P1	Q5VSP4	162 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	PLPP4	Q5VZY2	271 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SAXO2	Q658L1	398 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	LAIR2	Q6ISS4	152 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	C8orf82	Q6P1X6	216 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	WDR73	Q6P4I2	378 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	TMPRSS11A	Q6ZMR5	421 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	ZNF783	Q6ZMS7	281 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	MEX3B	Q6ZN04	569 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	PIWIL4	Q7Z3Z4	852 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SZRD1	Q7Z422	152 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	DDX53	Q86TM3	631 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	NAA40	Q86UY6	237 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	TRIM69	Q86WT6	500 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	NRSN1	Q8IZ57	195 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	PRSS35	Q8N3Z0	413 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	FSTL5	Q8N475	847 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	NAT16	Q8N8M0	369 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	OR5T1	Q8NG75	326 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	OR14A16	Q8NHC5	309 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	STOML3	Q8TAV4	291 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	STK35	Q8TDR2	534 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	C2orf15	Q8WU43	125 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	BTN2A2	Q8WVV5	523 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	BAD	Q92934	168 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	TNFRSF14	Q92956	283 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	TMBIM1	Q969X1	311 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SLAMF9	Q96A28	289 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	RPL10L	Q96L21	214 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SGCZ	Q96LD1	299 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	ADAD1	Q96M93	576 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	MCCC1	Q96RQ3	725 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	TRIB3	Q96RU7	358 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	H2AFJ	Q9BTM1	129 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	TM6SF2	Q9BZW4	377 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	RHOJ	Q9H4E5	214 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	NMRAL1	Q9HBL8	299 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	SIRT7	Q9NRC8	400 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	RBFOX1	Q9NWB1	397 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-223	ENST00000640931	FIS1	Q9Y3D6	152 aa		7.53	□□□□□ -1.2
RTTN-223	ENST00000640931		A0A087X0M5	115 aa		7.52	□□□□□ -1.21
RTTN-223	ENST00000640931		A0A1B0GX30	115 aa		7.52	□□□□□ -1.21
RTTN-223	ENST00000640931	GRXCR1	A8MXD5	290 aa		7.52	□□□□□ -1.21
RTTN-223	ENST00000640931	NPIPB8	E9PQR5	432 aa		7.52	□□□□□ -1.21

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