RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 CAPN14A8MX76 684 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 ASNA1O43681 348 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 HS6ST1O60243 411 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 ZIC2O95409 532 aaPredicted RBP24.49■■□□□ 1.51
VEGFA-231ENST00000640499 PTGDSP41222 190 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 CASP3P42574 277 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 PLCXD2Q0VAA5 305 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 HYAL4Q2M3T9 481 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 GFRALQ6UXV0 394 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 RGS9BPQ6ZS82 235 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 NUP54Q7Z3B4 507 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 FGD2Q7Z6J4 655 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 CLECL1Q8IZS7 167 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 NATD1Q8N6N6 113 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 NUP43Q8NFH3 380 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 FAM120BQ96EK7 910 aaKnown RBP24.49■■□□□ 1.51
VEGFA-231ENST00000640499 SLC35A4Q96G79 324 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 SECISBP2Q96T21 854 aaKnown RBP24.49■■□□□ 1.51
VEGFA-231ENST00000640499 ANGPTL4Q9BY76 406 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 ACBD3Q9H3P7 528 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 ATAD3AQ9NVI7 634 aa24.49■■□□□ 1.51
VEGFA-231ENST00000640499 FAM166BA8MTA8 275 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 EMC8O43402 210 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 SEMA7AO75326 666 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 TRIM3O75382 744 aaPredicted RBP24.48■■□□□ 1.51
VEGFA-231ENST00000640499 PRKAG1P54619 331 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 PPIAP62937 165 aaKnown RBP24.48■■□□□ 1.51
VEGFA-231ENST00000640499 HSF1Q00613 529 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 LSM12Q3MHD2 195 aaKnown RBP24.48■■□□□ 1.51
VEGFA-231ENST00000640499 FNDC7Q5VTL7 733 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 OR8J2Q8NGG1 315 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 DIO2Q92813 273 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 USP9XQ93008 2570 aaPredicted RBP24.48■■□□□ 1.51
VEGFA-231ENST00000640499 TESCQ96BS2 214 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 C16orf58Q96GQ5 468 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 MARK4Q96L34 752 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 IL1RL2Q9HB29 575 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 EQTNQ9NQ60 294 aa24.48■■□□□ 1.51
VEGFA-231ENST00000640499 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.48■■□□□ 1.51
VEGFA-231ENST00000640499 OR6C70A6NIJ9 312 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 C9JVG2 144 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 TP53I11O14683 189 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 REM1O75628 298 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 RFPL3SP0C7P2 107 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 ACP2P11117 423 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 DDX5P17844 614 aaKnown RBP24.47■■□□□ 1.51
VEGFA-231ENST00000640499 TMED10P49755 219 aaKnown RBP24.47■■□□□ 1.51
VEGFA-231ENST00000640499 IDH3AP50213 366 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 HBA1P69905 142 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 KRTCAP3Q53RY4 240 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 SPANXN4Q5MJ08 99 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 NXNQ6DKJ4 435 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 GK5Q6ZS86 529 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 TMEM251Q8N6I4 163 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 RNF138Q8WVD3 245 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 ADOQ96SZ5 270 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 EBF4Q9BQW3 602 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 ZDHHC11Q9H8X9 412 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 OSGIN2Q9Y236 505 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 HRH3Q9Y5N1 445 aa24.47■■□□□ 1.51
VEGFA-231ENST00000640499 GXYLT2A0PJZ3 443 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 ADAM10O14672 748 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 DIAPH2O60879 1101 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 MFSD12Q6NUT3 480 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 TMEM81Q6P7N7 255 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 CEP70Q8NHQ1 597 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 COL21A1Q96P44 957 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 DEFB127Q9H1M4 99 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 C3orf14Q9HBI5 128 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 PLSCR2Q9NRY7 297 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 MAPRE3Q9UPY8 281 aa24.46■■□□□ 1.51
VEGFA-231ENST00000640499 RNASET2O00584 256 aaKnown RBP24.45■■□□□ 1.5
VEGFA-231ENST00000640499 TFECO14948 347 aaPredicted RBP24.45■■□□□ 1.5
VEGFA-231ENST00000640499 NKX2-2O95096 273 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 IGKV1D-16P01601 117 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 CELA3AP09093 270 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 GABRA3P34903 492 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 ZFP36L2P47974 494 aaKnown RBP24.45■■□□□ 1.5
VEGFA-231ENST00000640499 PLGLB1Q02325 96 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 CYP27C1Q4G0S4 372 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 SLC16A11Q8NCK7 471 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 PIK3R3Q92569 461 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 EFHD2Q96C19 240 aaPredicted RBP24.45■■□□□ 1.5
VEGFA-231ENST00000640499 RILPQ96NA2 401 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 MS4A4EQ96PG1 132 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 YIPF4Q9BSR8 244 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 DOHHQ9BU89 302 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 ZFP64Q9NPA5 681 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 ZCCHC3Q9NUD5 404 aaKnown RBP24.45■■□□□ 1.5
VEGFA-231ENST00000640499 GPATCH2Q9NW75 528 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 FLRT3Q9NZU0 649 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 CBLCQ9ULV8 474 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 ZNF835Q9Y2P0 537 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 ZNF407Q9C0G0 2248 aa24.45■■□□□ 1.5
VEGFA-231ENST00000640499 TGDSO95455 350 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 STSP08842 583 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 RNF224P0DH78 156 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 MAGEA5P43359 124 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 KIR3DL1P43629 444 aa24.44■■□□□ 1.5
VEGFA-231ENST00000640499 CCT3P49368 545 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms